Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0730 ATGGAGTTCGAGGTGAAGCTTGTTGCCGCCATCGACAATTGCTTCGTCTCCCTTCCCCTCCCTCTCATCCAAACTCTCCAATCCACGCGCTCCTCTCCTCTCCCTCACATACTCGCCCTCGAGCTTCGTTCTCCCACCCACCCTCCCAACCTCTGGTTCGTCGCTTGGTCCGGCGCCACTTCTTCTTCTCCCTCCGCCATCGAGGTTTCGAAACAATTTGCGGAGTGCATTTCGTTGCCGAATCACGGTACTGTTCAGGTGAGAGCTGCTTCCAATGTGGCTCATGCTTCTCTTGTTACGATAGAGCCTCATACCGAGGATGATTGGGAGGTTTTGGAACTCAATTCCGAACAAGCTGAGGCTGCTATCCTCAACCAGGTCAGGATTGTTCATGAAGGGATGAGATTTCCTTTGTGGTTACATGGTCACACCGTCATCACATTCCATGTCACTTCTGTTTTCCCGAAGAAAGCGGTGGTACAACTCATGCCAGGAACTGAAGTTGCCGTTGCTCCCAAAAGGCGCAATAGAATGTTGGATTCAGCAGGAGATTCACATCTAGAATCCTGTGATAAGGAACAAAGTGCAAAGATGCTTCTCCGTATACAAGATCCAGGGGTATTATGTCATACCAGAACTGATGTCAAAGGTGTTGAGCTCCATATGGGGCTCACTTCTGTRGCTTTTGTTCACCCAGAAACAGCCAAGCACTTCTCTTTTAACATGCTTCAGCCAGTTTCCTTAGTACCAAGAATATCCAAGGAGAATGCCAATATTTCGAAAACCAATGTTTTGAAATCCAAAGGCGGGTCAKCTGGCAATGAAGTTGAGAATGGAAATTTAACTGACAAGAAACAACATCGACAAGCTGTTGTTCATCTCTTATTTTCAGAATCTGTGGCTGCAGGGCATGTGATGTTAGCCAAGTCTCTTCGCCTCTATTTGAGAGCTGGCCTACATACATGGGTTTATTTGAAAGCATATGATATCATTAGGGAGAAAAGTATTCCATCCATCACTTTTTCTCCTTGTCAATTCAAACTATTAAAGCAGGATAGTTCTGCTGAGAAAGATGGTCTGGATAGCCACAATAATCACATGAATGGAAAATTACTTGCGAAATCTATGTCAGGTGACTTTGTGGACCCTATAGATTGGTCAATTAACAATGAAGTTGTTGCAGCTCTTTCTGATGAATCCAACTGCAAAGCAGAGGAAGAGAATGCAAATCAGTCTCAGAATCAAAAGAGGATAAAGAGTCTTGTTCGGCTGTGGTATATTGCACAAATTGAGGCAATTACTTCTATTACGGGTGTAGAGGTTAATTCATTGGTCATGTGTAGCCAAACTTTGCTTGATTTCAAATTAAACTGTCACAACCTTGGGGATAATGGGAGAGCTCCCCTACCTTATAATTCTTCAGAGAATAGTGGCAAGACTGCTGAAGTGTTATTTATTTTGACTTTTGGTGATGAACATCTGCATCATGGGAAACCTAATGCATACAAAGTTGCTCTCGGTAAAAGCCTTAAAAGTATCAATATAGGCGATCTGCAGCTTTTTGAAGGGATGAAATTGGGTGATCCCGTGTCTATTCATTCTATCGAAGAGACAGCATCTCAAGAGCACATTAGTTCAAATGTATCTTTACTTAGCTGGATGGAGAAACCAGCTTCTGATATTATTAATCGGATGTTGGTATTGTTATCTTTGAAGTGTGGTCTGTGGTTTGGTTCATGCAACTTGCCACTCCCTGGACATGTTTTAGTACACGGACCACCAGGCTCTGGGAAAACTTCATTATCAAGGGCTGTAGCCAAATCCCTTGAGAATCATAAAGATATCTTAGCACACATAGTTTTTGTGCCCTGCTCAAAACTTTCTTTGGAGAAGGTCCCAATAATTCGCCAAGAACTTACAAACCATGTAATGGAAGCTTTAAACCATGCGCCCTCCATCGTAATCTTTGATGATCTTGATAGCATAATTTCAACTTCTGATTCCGAAGGATCTCAGCCCTCAACGTCTGTTGCTGGACTCTCAGATATTTTGGTTAACATCATCGATGAATATAGGGAGAAGAGGCAAAAATCATGTGGATTTGGACCGGTAGCCTTCATAGCTTCCATACAGTCACTGGAGAAACTGCCACAGTCTTTGAGCTCTTCAGGACGCTTTGACTTCCACATACAGTTGCCAGCTCCTGCAGCTTCAGAGCGTAAAGCTATGTTGAAGCATGAAATTGAAAGGCGTCACTTGCAATGTGGTGAAGACATCCTACTGGATGTGGCTGTCAAATGTGATGGTTATGATGGCTATGATCTGGAAATATTAGTTGACAGAGCTGTCCATGCTGCTGTTCATCGATTTTTGCCATCAAATGCTGCCAATAATGAGCACGAGAGTCCTGCTTTACTAAGAGAGGATTTCTCCCAGGCAATGCATGGTTTTCTTCCAGTTGCAATGCGTGACATCACAAAATCTGCATCTGATGATGGTCGTTCTGGATGGGATGATGTGGGTGGCCTCGTTGACATCCGAAATGCTATTAAGGAGATGATAGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCGCAAGCACCATTGAGGTTGAGGTCAAACGTCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATTGTGGGTGCTGCTGCGGCTGCTTCATCGCTTCGATTCATATCAGTGAAAGGACCAGAGCTGTTGAACAAGTATATTGGTGCTTCTGAACAAGCCGTTAGGGATATATTCTCTAAAGCAGCAGCAGCAGCTCCTTGCTTACTATTTTTTGATGAGTTTGATTCTATTGCTCCTAAGAGAGGGCATGACAATACTGGAGTAACTGATCGTGTCGTTAATCAATTTCTGACTGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTATTTGCTGCTACAAGTAGACCGGATTTACTTGATGCGGCACTGCTGAGACCTGGTAGGTTAGATCGACTTCTTTTCTGTGATTTTCCATCTTGGCATGAGAGATTGGAAATTCTGACTGTTCTTTCTAGAAAGTTACCAATGGCGCATGATATAGATTTGGCCACAGTAGCTAAAATGACTGAGGGATTCAGTGGAGCTGACCTCCAAGCTCTCCTCTCAGATGCACAGCTCGCAGCAGTTCATGAAGTTCTGGACAATTTGGGTGCCTCTGCGCCGGGTAAAGCACCAGTTATTACAGATGCTTTACTGAAGGCCAATGCCTTGAAGGCTAGACCATCTGTTTCAGAAGAAGAGAAAAGGAGACTCTACAGTATCTATGGCCAGTTCCTGGATTCAAAGAGATCTGTTGCTGCTCAGTCAAGGGATGCCAAAGGCAAGAGAGCAACTCTAGCGTGA 3387 0.4373 MEFEVKLVAAIDNCFVSLPLPLIQTLQSTRSSPLPHILALELRSPTHPPNLWFVAWSGATSSSPSAIEVSKQFAECISLPNHGTVQVRAASNVAHASLVTIEPHTEDDWEVLELNSEQAEAAILNQVRIVHEGMRFPLWLHGHTVITFHVTSVFPKKAVVQLMPGTEVAVAPKRRNRMLDSAGDSHLESCDKEQSAKMLLRIQDPGVLCHTRTDVKGVELHMGLTSVAFVHPETAKHFSFNMLQPVSLVPRISKENANISKTNVLKSKGGSXGNEVENGNLTDKKQHRQAVVHLLFSESVAAGHVMLAKSLRLYLRAGLHTWVYLKAYDIIREKSIPSITFSPCQFKLLKQDSSAEKDGLDSHNNHMNGKLLAKSMSGDFVDPIDWSINNEVVAALSDESNCKAEEENANQSQNQKRIKSLVRLWYIAQIEAITSITGVEVNSLVMCSQTLLDFKLNCHNLGDNGRAPLPYNSSENSGKTAEVLFILTFGDEHLHHGKPNAYKVALGKSLKSINIGDLQLFEGMKLGDPVSIHSIEETASQEHISSNVSLLSWMEKPASDIINRMLVLLSLKCGLWFGSCNLPLPGHVLVHGPPGSGKTSLSRAVAKSLENHKDILAHIVFVPCSKLSLEKVPIIRQELTNHVMEALNHAPSIVIFDDLDSIISTSDSEGSQPSTSVAGLSDILVNIIDEYREKRQKSCGFGPVAFIASIQSLEKLPQSLSSSGRFDFHIQLPAPAASERKAMLKHEIERRHLQCGEDILLDVAVKCDGYDGYDLEILVDRAVHAAVHRFLPSNAANNEHESPALLREDFSQAMHGFLPVAMRDITKSASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKLPMAHDIDLATVAKMTEGFSGADLQALLSDAQLAAVHEVLDNLGASAPGKAPVITDALLKANALKARPSVSEEEKRRLYSIYGQFLDSKRSVAAQSRDAKGKRATLA* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0730 1128 Gene3D - 836 1097 IPR027417 -
Amo04g0730 1128 Gene3D - 539 735 IPR027417 -
Amo04g0730 1128 Gene3D - 736 825 - -
Amo04g0730 1128 Gene3D - 93 173 - -
Amo04g0730 1128 PANTHER - 3 1125 - -
Amo04g0730 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 837 1063 IPR027417 -
Amo04g0730 1128 CDD AAA 841 1004 - -
Amo04g0730 1128 ProSitePatterns AAA-protein family signature. 975 993 IPR003960 GO:0005524|GO:0016887
Amo04g0730 1128 SUPERFAMILY ADC-like 10 89 IPR009010 -
Amo04g0730 1128 SUPERFAMILY Cdc48 domain 2-like 95 172 IPR029067 -
Amo04g0730 1128 CDD AAA 582 733 - -
Amo04g0730 1128 SMART AAA_5 584 736 IPR003593 -
Amo04g0730 1128 SMART AAA_5 871 1007 IPR003593 -
Amo04g0730 1128 Gene3D - 1006 1085 - -
Amo04g0730 1128 Pfam Peroxisome biogenesis factor 1, N-terminal 99 172 IPR015342 GO:0005524|GO:0005777|GO:0007031
Amo04g0730 1128 Pfam ATPase family associated with various cellular activities (AAA) 875 1002 IPR003959 GO:0005524|GO:0016887
Amo04g0730 1128 Pfam ATPase family associated with various cellular activities (AAA) 588 733 IPR003959 GO:0005524|GO:0016887
Amo04g0730 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 568 814 IPR027417 -
Amo04g0730 1128 Pfam AAA+ lid domain 1027 1063 IPR041569 -
Amo04g0730 1128 PANTHER AAA-FAMILY ATPASE 3 1125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0730 Amo-Chr4 22674039 22683710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0730 588 798 Calmodulin-binding Proteins AT3G56690 26.887 1.35e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0730 K13338 - gmx:100803882 1776.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1825 14 39682302 39691719 Amo04g0730 04 22674039 22683710 hybridization