Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0687 ATGAGGTTGGTGGAGTTTTGGTGTATATTTATAATAATTATATTGGCCAATATTCTTGAACCTGGGAAGGCAGAGGTTTATATAGTAACCGTTGAAGGTGAGCCTATCATAAGTTACACCGGCGGTATCGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATCGATACCACAAGTGAATTGGTCACTTCTTATGCACGCCACCTTGAGAAAAGACATGATATGCTACTTGAAATGTTGTTTGATGCTGGGACGTACACAAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTGCATCTTTCCCCAGAGCAGGCAGAAACTCTTAGACATGCTCCTGGTGTTAAATCTGTTGTGAGGGACTGGAAAGTGAAGAGACTTACAACACATACACCACAATTTTTGGGGCTTCCAACTGGAGTGTGGCCGACAGGAGGTGGCTATGATCGAGCCGGAGAAAACATAGTGATTGGATTTGTGGACTCTGGGATATATCCTCACCATCCCAGCTTTGTCACTTATAATACTGAACCATATGGGCCACTTCCAACGTATAGAGGAAAATGTGAAGTTGACCCGGAGACTAAGAGAAGTTTCTGTAATGGGAAGATTATAGGAGCACAGCATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTATAGTTGATTTTGCTTCTCCTTTGGACGGGGATGGGCATGGAAGTCATACTGCCTCTATTGCGGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCTCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTCTTTGGAGGTTTCATTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGGGTTGATATACTCAGCCTTTCTGTTGGACCCAACAGTCCTCCAGCAACCACCAAAACCACTTATTTAAACCCATTTGATGCTACGCTTCTTGGAGCTGTGAAAGCTGGTGTCTTTGTTGCACAGGCTGCCGGAAATGGTGGCCCCTTTCCTAAGACTTTAGTTTCGTATAGTCCATGGATAGCATCCGTAGCTGCAGCAATTGATGATCGTAGATATAAAAATCATCTGACTCTTGGAGATGGTAAAATCTTGGCTGGAATTGGTCTATCACCTTCTACACATTTTAACCAATCATACACATTAGTTGCTGCAAATGATGTTGTGCTAGACTCCTCAGTTATGAAGTACAATCCCACGGATTGCCAGAGACCTGAACTTCTAAACAAGAACTTGATAAAGGGGAACATTCTTCTTTGTGGTTATTCTTTCAACTTTGTAGTTGTCCCTGTTGGCATTCCTGGGATTGTTATCGCAGATGTCAGCAAGTCAAAGGAACTAATAGATTATTATAAAATCTCCACTCCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAAGGTACTGGAAAAATTGGGGATGGTTTGATGCCTATTCTTCATAAGTCTGCACCACAGGTGGCTTTATTCTCTGCAAGAGGACCAAATATAAAGGACTTTAATTTCCAAGAGGCAGATCTTCTCAAGCCAGATATATTGGCACCGGGATCATTAATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAACCAAATTATATTGGAGAGGGATTTGCCATGATATCTGGAACTAGCATGGCTGCTCCACATATAGCCGGCATTGCGGCTCTCATAAAGCAGAAACATCCACATTGGAGCCCTGCCGCCATCAAATCAGCCTTGATGACGACATCAACAACTCTAGACAGAGCAGGAAATCCTATTCTAGCACAGCAATATTCTGAAACACAGGCGATGAAGCTAGTAAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTAATCCAAGAGATGCTTTGGACCCTGGGCTAATCTTTGATGCAGGATACAATGATTATCTAGGGTTCTTGTGCACAACACCCGGCATCGACATTCATGAGATAAAGAATTATACAAACACACCATGCAACAACACAATGGGCAACCCAGCAAATCTAAACAGTCCTTCCGTTACAGTCTCCCATCTAGTAAGAACTCGAGTTGTCACCCGAACCGTCACAAATGTTGCAGGGGAAGAAGAAACATATGTGAATACAGCTAGAATGGACCCTGCAGTTGCCATTGAAGTCAATCCTCCAGCAATGACCATCAGACCAGGCGCATCGCGTAAGTTTACCGTGACACTAACAGTTCGGTCAGTGACCGGAACCTATAGCTTTGGTGAGGTTTTGATGAAAGGGAGCAGAGGTCACAAGGTGAGGATCCCTGTTCTGGCCAATGGATACTCAAGATAG 2358 0.4377 MRLVEFWCIFIIIILANILEPGKAEVYIVTVEGEPIISYTGGIDGFEATAVESDEKIDTTSELVTSYARHLEKRHDMLLEMLFDAGTYTKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVVRDWKVKRLTTHTPQFLGLPTGVWPTGGGYDRAGENIVIGFVDSGIYPHHPSFVTYNTEPYGPLPTYRGKCEVDPETKRSFCNGKIIGAQHFAQAAIAAGAFNPIVDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTYLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLTLGDGKILAGIGLSPSTHFNQSYTLVAANDVVLDSSVMKYNPTDCQRPELLNKNLIKGNILLCGYSFNFVVVPVGIPGIVIADVSKSKELIDYYKISTPRDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFNFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYIGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPILAQQYSETQAMKLVKATPFDYGSGHVNPRDALDPGLIFDAGYNDYLGFLCTTPGIDIHEIKNYTNTPCNNTMGNPANLNSPSVTVSHLVRTRVVTRTVTNVAGEEETYVNTARMDPAVAIEVNPPAMTIRPGASRKFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0687 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 130 IPR037045 -
Amo04g0687 785 PANTHER CUCUMISIN-RELATED 16 447 - -
Amo04g0687 785 Gene3D Peptidase S8/S53 domain 158 654 IPR036852 GO:0004252|GO:0006508
Amo04g0687 785 Gene3D - 371 501 - -
Amo04g0687 785 Pfam Peptidase inhibitor I9 26 129 IPR010259 -
Amo04g0687 785 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Amo04g0687 785 SUPERFAMILY Protease propeptides/inhibitors 86 128 - -
Amo04g0687 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Amo04g0687 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 447 IPR045051 -
Amo04g0687 785 CDD Peptidases_S8_3 132 600 IPR034197 -
Amo04g0687 785 Pfam Subtilase family 156 606 IPR000209 GO:0006508|GO:0008236
Amo04g0687 785 SUPERFAMILY Subtilisin-like 131 645 IPR036852 GO:0004252|GO:0006508
Amo04g0687 785 Gene3D - 658 782 - -
Amo04g0687 785 ProSiteProfiles Serine proteases, subtilase domain profile. 125 641 - -
Amo04g0687 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 449 784 IPR045051 -
Amo04g0687 785 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Amo04g0687 785 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Amo04g0687 785 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Amo04g0687 785 Pfam Fibronectin type-III domain 686 779 IPR041469 -
Amo04g0687 785 PANTHER CUCUMISIN-RELATED 449 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0687 Amo-Chr4 20055479 20061627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0687 3 785 Subtilisin-like Serine Gene Family AT4G30020 76.190 0.0 1273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0687 - - gmx:100784999 1357.81