Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0682 ATGGCAAAAATCCCCGGTAGGGCGGGTATCTGCGGGGATTTACCCACCGGGGGGCAGGTATGGGGTGATTTATACATGCGGAGACGGGGGATGGGGCCCCGTATAATAAACGGAGCGGTGGCAGGAGTAGAGTTCAAAACCTCAGTCCCTTTTGTCTCCTTCCCAAACACTGCCGACCGCCACCTCCCACGACCCAGCGCCGCCTCCCACCTCCTGAGTGGCTCGGTCTCTCACTGGAGATCCCGAGCTCACCGTCGCTGGTCGTCATCTTCTCATCTTCGCCGTTCGTCTGCCAAATCGCCGGTCTTCCCTGCGGTTTCTACCTCAGGTAAGTTCCATGAACTGAGGAGGAACAGAATATTTTTACTTGGATTACAAAAGTTGGGCAAAGGTGATTGGCGTGGAATTGCAAAAAACTATGTTATATCAAGAACCCCTACTCAGGTGGTTAGTCACGCTCAAAAGTATTTCATCAGGCAAAACAACGTGTTTAGACAGAAAAGATGCACCAGCTTGTTTGACATTGATGCAGATGAAGTTTTTACTCTTGTCTGCAATTACTATCCATGA 570 0.5053 MAKIPGRAGICGDLPTGGQVWGDLYMRRRGMGPRIINGAVAGVEFKTSVPFVSFPNTADRHLPRPSAASHLLSGSVSHWRSRAHRRWSSSSHLRRSSAKSPVFPAVSTSGKFHELRRNRIFLLGLQKLGKGDWRGIAKNYVISRTPTQVVSHAQKYFIRQNNVFRQKRCTSLFDIDADEVFTLVCNYYP* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0682 189 SUPERFAMILY Homeodomain-like 118 162 IPR009057 -
Amo04g0682 189 Gene3D - 116 163 - -
Amo04g0682 189 PANTHER OS01G0187900 PROTEIN 119 180 - -
Amo04g0682 189 Pfam Myb-like DNA-binding domain 121 157 IPR001005 -
Amo04g0682 189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 161 IPR017930 -
Amo04g0682 189 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 118 160 IPR006447 GO:0003677
Amo04g0682 189 PANTHER TRANSCRIPTION FACTOR KUA1 119 180 - -
Amo04g0682 189 CDD SANT 119 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0682 Amo-Chr4 19638562 19639881 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo04g0682 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0682 - - nnu:104610453 107.842