Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0576 TACTTGCCAACTTATATTCAAGAGTGCTTCATATCTTTTTTGTTATATCAACAGGTTGGAGCACTTGTTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTTCTTCCAGACAACACAGGGCTTGACCCCTCACAGACCTCTTTCTTCCAGGTTCTGAATATTCCAACCAAGATTAATAAGGGTACTGTTGAAATTATCACCCGTGTGGAACTTATTAAGAAGGGTGACAAGGTCGGTTCTTCTGAAGCTGCACTGCTTTCCAAGCTTAGCATCAGGCCCTTCTCATATGGTCTTATTGTCCTGTCTATGACAATAGTTCAGTATTTAGCCCTGAGGTTCTTGATCTCACTGACGACGACCTTGTTAAGGAGTTCGTCGTTGGAGTCTCAATGGTGA 399 0.4261 YLPTYIQECFISFLLYQQVGALVRVGLVAPIDVVVLPDNTGLDPSQTSFFQVLNIPTKINKGTVEIITRVELIKKGDKVGSSEAALLSKLSIRPFSYGLIVLSMTIVQYLALRFLISLTTTLLRSSSLESQW* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0576 132 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 17 104 - -
Amo04g0576 132 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE 17 104 - -
Amo04g0576 132 Pfam Insertion domain in 60S ribosomal protein L10P 24 92 IPR040637 -
Amo04g0576 132 Gene3D - 20 96 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0576 Amo-Chr4 15129046 15129521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0576 18 104 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 87.356 5.68e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0576 K02941 - ahf:112794771 212.231