Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0549 ATGCCAACTGTCCTTTCAGTTACAATGGCTATTGGTTCACACAAATTGTCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTTTGA 183 0.4044 MPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0549 60 Gene3D - 1 35 - -
Amo04g0549 60 ProSitePatterns E1-E2 ATPases phosphorylation site. 41 47 IPR018303 -
Amo04g0549 60 SUPERFAMILY HAD-like 27 52 IPR036412 -
Amo04g0549 60 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 34 IPR023298 -
Amo04g0549 60 PANTHER CALCIUM-TRANSPORTING ATPASE 1 60 - -
Amo04g0549 60 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 60 - -
Amo04g0549 60 Gene3D - 36 50 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0549 Amo-Chr4 14022323 14022811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0549 1 60 Primary Pumps ATPases AT2G07560 98.333 9.83e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0549 K01535 - gmx:100806580 117.472