Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0510 ATGCGAGTACTTGGTGTAGAGAGAACAGCATCACAACAGGAAATAAAGAAGGCTTATTACAAGTTAGCATTGAGGCTACATCCTGACAAGAACCCTGGTGATGAGGAGGCTAAAGCAAAATTTCAGCAACTGCAAAATGTTATCTCGATTCTTGGGGATGAAGAAAAGCGAGCCATTTATGATCAGATTGGTTGTGATGATGATGCTGTGAGTGTTCTTGGTTTCTCGTATCTGTAG 237 0.4135 MRVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRAIYDQIGCDDDAVSVLGFSYL* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0510 78 PRINTS DnaJ domain signature 36 56 IPR001623 -
Amo04g0510 78 PRINTS DnaJ domain signature 19 34 IPR001623 -
Amo04g0510 78 PRINTS DnaJ domain signature 56 75 IPR001623 -
Amo04g0510 78 PRINTS DnaJ domain signature 1 19 IPR001623 -
Amo04g0510 78 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 2 69 - -
Amo04g0510 78 Gene3D DnaJ domain 2 72 IPR036869 -
Amo04g0510 78 Pfam DnaJ domain 3 61 IPR001623 -
Amo04g0510 78 ProSiteProfiles dnaJ domain profile. 1 64 IPR001623 -
Amo04g0510 78 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 2 69 IPR042977 -
Amo04g0510 78 SUPERFAMILY Chaperone J-domain 2 68 IPR036869 -
Amo04g0510 78 CDD DnaJ 3 53 IPR001623 -
Amo04g0510 78 SMART dnaj_3 1 56 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0510 Amo-Chr4 11649884 11650511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0510 3 61 C2H2 Transcription Factor Family AT1G74250 40.625 2.37e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0510 K09529 - gmx:100781463 129.028