Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0458 ATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGACTTTCCAATTTTATAACGCTTATGCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACATCGTTAGGGATAACAAAGGTAGAATCATTTACAGGCAACTTATTTGCAATAAGGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTCACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCATGACTACGGCTGTGGAAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTAACCCCCTCCCCCTTCCCCCGCCCCCAATTTGTCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCGTGCGATGTGGTCCCATTGTTTCCTACGGAATAAGTTTTTTCGGGTACATAAGAACGACGTCACAGTGTGAAGGTATAAACTCTCTCATCAGATTTTATGTTAATCGCAAGAATACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAAAAGTATAGACACAATGAATTAATAGCTGACTTTAAGTGTCAGTGCTTTAAGCCAATGATGAGTACCTTGTTGGAGGTATATGAAAGATATGCATATTAA 654 0.4281 MVEDIWNLEFRTEDETFQFYNAYACWHGFVMRKDDIVRDNKGRIIYRQLICNKEGWRNMRYLDLDDRSREARSLTRTKCPARLRVKHDYGCGRWKVSCFVESHNHDLTPSPFPRPQFVTTLLGVPGWKRRTKLVRCGPIVSYGISFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKKYRHNELIADFKCQCFKPMMSTLLEVYERYAY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0458 217 Pfam FAR1 DNA-binding domain 18 108 IPR004330 -
Amo04g0458 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0458 Amo-Chr4 9065630 9067000 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g0458 FAR1 5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0458 - - aip:107640898 286.574