Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0456 ATGATTTTTATTGTGATTGTTCCTCACCATGGATTCTTGTGGCGACCCCCTTGTTCTTCATTTGGCGCCTCTCATTCTGAAAACAAAGCTCGGCCCATTAGAGCTTCGGTTGATGCACCCACATTTCCATTGTTTCAGACTCCAAAACAGCATGACTCGGCCTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAAGATCGGTTATGTTCGAAGCATGAGAGCTTACGGAGTTGAGTTTAAGGAAGGGCGGGATGGATTTGGTGTGTATGCTTCCAAAGATGTGGAACCTCTCCGGCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAACTCCCATGGATGTTTTTCCCAGATATAATTCCTATAGGTCATCCAATATTTGATATTATCAACTCTACAGATCCAGAGACAGATTGGGACTTAAGGTTAGCTTGCCTCCTCCTATATGCATTTGATTGCGAAGACAACTTTTGGCAGTTGTATGGTGACTTCTTACCAAGTGCAGATGAGTGTACCAGCTTACTTCTAGCTTCAGAGGATGAACTTTCAGAGCTTCAAGATCCCGATCTTGCTTCTACTATGAGAAACCAGCAATATCGAGCCCAAGAATTCTGGGAAATGAACTGGCACAATTCTGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCGAAGGTTCTTGTGGGCAGTGGGTATTGCACAGTCACGATGTATTAACATGCAGACGAGAATTGGTGCATTAACTCAAGATGCAAATATGCTTATTCCTTATGCTGATATGCTGAACCATTCCTTTGAGCCGAATTGCTTTCTGCATTGGCGTTTTAAGGACAGGATGCTTGAAGTTCTTATAAATGCTGGCGAGCAAATTAAAAGGGGAGATGAGATGACAATTAATTACATGAGCGGACAGAAGAATGAGATCCTAATGCAAAGATATGGATTTTCATCACCGGTGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCAAAGATTCATCTGGATTCCTTTTTGTCCGTCTTCAATATATCTGGCCTTCCCGAAGAATATTACCATAACACAGAATGTCTAGCAAACGATGGCGATACTTTTGTTGATGGAGCTGTTGTAGCTGCAGCACGAACATTGCCAACTTGGTCGGACAAGGATGTGCCTCCAATCCCTAGTGCAGAAAGAATGGCAGTAAAGGAGTTGCAACAAGAATGTCGACAGATGCTTGCTCAATACGCTACAACCTCTAAGCAAGACGAGAAATTGCTTGTTCATTGCGAATCCTACGCATGCAGGTATAGATTGCACCGGAAATTGTTCATTGAGAAGGTTATCCAAGCATTGGAGATCTATCAAGATAAGATACTTTTCTGA 1395 0.4265 MIFIVIVPHHGFLWRPPCSSFGASHSENKARPIRASVDAPTFPLFQTPKQHDSASELEPADPDFYKIGYVRSMRAYGVEFKEGRDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPIGHPIFDIINSTDPETDWDLRLACLLLYAFDCEDNFWQLYGDFLPSADECTSLLLASEDELSELQDPDLASTMRNQQYRAQEFWEMNWHNSAPLKIKRLARDPRRFLWAVGIAQSRCINMQTRIGALTQDANMLIPYADMLNHSFEPNCFLHWRFKDRMLEVLINAGEQIKRGDEMTINYMSGQKNEILMQRYGFSSPVNPWDVIKFSGNAKIHLDSFLSVFNISGLPEEYYHNTECLANDGDTFVDGAVVAAARTLPTWSDKDVPPIPSAERMAVKELQQECRQMLAQYATTSKQDEKLLVHCESYACRYRLHRKLFIEKVIQALEIYQDKILF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0456 464 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 38 457 - -
Amo04g0456 464 Coils Coil 405 425 - -
Amo04g0456 464 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 38 457 - -
Amo04g0456 464 SUPERFAMILY SET domain 85 325 IPR046341 -
Amo04g0456 464 Pfam SET domain 86 309 IPR001214 GO:0005515
Amo04g0456 464 ProSiteProfiles SET domain profile. 65 310 IPR001214 GO:0005515
Amo04g0456 464 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 321 456 IPR036464 -
Amo04g0456 464 Gene3D set domain protein methyltransferase, domain 1 70 324 - -
Amo04g0456 464 Gene3D - 339 462 IPR036464 -
Amo04g0456 464 CDD SET_LSMT 77 324 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo04g0456 SET 6.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0456 - - gmx:100790985 749.584