Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0429 ATGGCAAATTCTTCCTTCTTCACATTCCTTCTCCTTTTGCTTCTTTACACCATTGTAGCCTCAGCCAACAATCCTAATGATGATGAGACAGTCCCAAGTGACAATGTTTTCACACTCCAAGTTCCAACATTAGATGATAGCATTTTGGATAATCTTCTTTCTTTTGGTTACTATCTTAAAAGTTGTCCTGAATTTGAATCCATCCTACATAACAAAGTCAAAGTATGGATTCAAAAGGATCACACTTTGGCAGCGAGTCTTCTCAGGTTGCAATTTCATGATTGCGTTGTTAGGGGTTGTGATGGGTCCATTCTATTGGACCATGATGGGAGTGAGAGAAGAGCAGAAGCAAGCAAGAAGCTAAGGGGGTTTAAAGTGATTAATGATATAAAGGAAGAGTTAGAGAGAATTTGCCCCAACACAGTGTCTTGTGCTGACATTCTAAGTGCAGCTGCAAGGGATGCCACTGTTGAATTGGGTGGACCCTATTGGGCAGTTCCTTATGGTAGAAAAGATGGCAGAATCTCCATTGCTAAAGAAACTCAAATCATTCCCATTGGCCGTGAAAATATTACTTCTTTGATTGAGTTCTTTCAATCCAAGGGCTTGACTCTCCTTGACTTAGTTGTTCTTTCAGGGTCTCATACAATTGGAAGAAGTTCATGTGGATCCATTCAATATAGGCTATACAACTACCAAGGGAGTGGAAAACCAGACCCAACAATAGATCCAAAGTATCTGAATTTCTTGCAAAGAAAGTGTAGGTGGGCCTCAGAGTATGTGGATCTTGATGCCACAACTCCAAACAAATTTGACAACAATTTCTACATTAACCTCAGCAAAAGAATGGGGTTGTTGTACACAGACCAATTGCTTTATTCTGATCCAAGAACTTCACCACTTGTTTCTGCATTGGCTTCAACACCCTCCATTTTCCAACATCAATTTGCTGTGTCTATGTCCAAGTTTGGAGTAATTGATGTTCTCACTGCTCAGGATGAAGGAGAAATCAGGACCAATTGCAATTTTGTCAATGCTTATTGA 1044 0.4004 MANSSFFTFLLLLLLYTIVASANNPNDDETVPSDNVFTLQVPTLDDSILDNLLSFGYYLKSCPEFESILHNKVKVWIQKDHTLAASLLRLQFHDCVVRGCDGSILLDHDGSERRAEASKKLRGFKVINDIKEELERICPNTVSCADILSAAARDATVELGGPYWAVPYGRKDGRISIAKETQIIPIGRENITSLIEFFQSKGLTLLDLVVLSGSHTIGRSSCGSIQYRLYNYQGSGKPDPTIDPKYLNFLQRKCRWASEYVDLDATTPNKFDNNFYINLSKRMGLLYTDQLLYSDPRTSPLVSALASTPSIFQHQFAVSMSKFGVIDVLTAQDEGEIRTNCNFVNAY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0429 347 ProSitePatterns Peroxidases active site signature. 84 95 IPR019794 GO:0004601
Amo04g0429 347 Gene3D Peroxidase, domain 2 185 323 - -
Amo04g0429 347 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 122 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 141 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 160 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PANTHER PEROXIDASE 46 344 - -
Amo04g0429 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Amo04g0429 347 PANTHER PEROXIDASE 25-RELATED 46 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 SUPERFAMILY Heme-dependent peroxidases 53 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 Pfam Peroxidase 71 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 CDD secretory_peroxidase 53 344 IPR033905 GO:0004601|GO:0042744
Amo04g0429 347 ProSiteProfiles Plant heme peroxidase family profile. 52 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 Gene3D - 56 345 - -
Amo04g0429 347 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Haem peroxidase superfamily signature 142 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Haem peroxidase superfamily signature 160 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo04g0429 347 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0429 Amo-Chr4 8342033 8345481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0429 49 346 Peroxidase AT1G30870 58.000 7.56e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0429 K00430 - gmx:100798229 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1561 14 28075535 28079019 Amo04g0429 04 8342033 8345481 hybridization