Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0409 ATGAAGACATGTTGGCCATGTCAGGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGTTGCAAAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGTGCAATTGATCAAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGGAAGATATTGCTGCATCACTGAACAAAGTTAAGGCCAAGTTTCTTAAAGCTAATGACAAGGATGTCGTTCGGTTTTGTAGAAAATGA 495 0.4 MKTCWPCQDFGIAKLLGEGQSKEYTKTMATVGYIAPVAKFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDQVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMEDIAASLNKVKAKFLKANDKDVVRFCRK* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0409 164 SUPERFAMILY Protein kinase-like (PK-like) 9 146 IPR011009 -
Amo04g0409 164 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g0409 164 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 8 154 - -
Amo04g0409 164 Pfam Protein kinase domain 9 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g0409 164 Gene3D Transferase(Phosphotransferase) domain 1 6 148 - -
Amo04g0409 164 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0409 Amo-Chr4 7961608 7962414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0409 9 152 Receptor kinase-like Gene Family AT3G47580 30.323 3.06e-21 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo04g0409 Pkinase 1.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0409 - K13420 aip:107647131 285.419