Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo04g0390 | ATGTTTAACTCCCACCGTTACAAACCCCTTATCTATCTAAACCTAAAAGTTCTATTCCGAAGAACACAACCACACATGTTCTGCACTTCACAATCACACTCTTTGACGGTTTCATACCTCATCAATAACCTTGGCTTCACCCCACAATCTGCTCTAAACGCATCAAAACGGCATCGTTTCAAGACCCCACACAAGGCAGACTTAATAATCGCATTCTTCAAGACCCATGGATTCTCCCATTCCCAAATCGCTGCCATTGTTGCCAAGCTACCTAAGATACTTTCAGCCAATCCGGAAAGAATCCTGCCAAAGTTTCAATTTCTGGCCTCCAAAGGTGCTTCCACCGATGACATTGTTCTGCTAGCCACTAGGAACCCTAGATTCTTGCATTCGAGCCTCAAGAACAACATAATCCCTACTTATGGAATGATGAACACCTTCTTTGAATCCGATCAGAAAACGCTCCGTTGCATTGCTTCTTTCCCTGCTTTGTTCATGGAGCCTCGCTTGGTGAAAAATGTCAAGTTGTTGGCTGATGCAGGAGTCTCTAACTCCGCAATCCGCCATTTGTGTCGTACCAGGGTGTCCGTGCTCTATTCTTCTGATTTGAGGAAGCTTGTGGATGAAGTAAAGGAATTAGGGTTTGATCCGTCATCGGTTAAATTCGCCATAGCTTTGCTAGCCAAGAAGACTATACGGAAATCACTGTGGGATGCGAAAGTCGATATCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAACGTCCCAAGCATTCTGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAATTAGGTTGGGACCCTTTGGCTCTTGCCAAGATTCCATGGCTTTTTGGATATAATTTGGAGAGAAGGATTATTCCGAGGGCTTTTGTTCTTCAGTATTTACTTTCAAGAGGTCTGAGAAACAAGAATGATAATTTAAGTACCCCATTTTATGTTTCTGAAGAGTTGTTCTTTAACAAGTTTGTGGAATGTTTTACCGAGGAAAGGTCTCAACTACGTAAGATATACTATGAGAAAAAAGGATGTTCATGA | 1095 | 0.4219 | MFNSHRYKPLIYLNLKVLFRRTQPHMFCTSQSHSLTVSYLINNLGFTPQSALNASKRHRFKTPHKADLIIAFFKTHGFSHSQIAAIVAKLPKILSANPERILPKFQFLASKGASTDDIVLLATRNPRFLHSSLKNNIIPTYGMMNTFFESDQKTLRCIASFPALFMEPRLVKNVKLLADAGVSNSAIRHLCRTRVSVLYSSDLRKLVDEVKELGFDPSSVKFAIALLAKKTIRKSLWDAKVDILKSWGWSKETTSQAFWRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKIPWLFGYNLERRIIPRAFVLQYLLSRGLRNKNDNLSTPFYVSEELFFNKFVECFTEERSQLRKIYYEKKGCS* | 365 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo04g0390 | 364 | Pfam | mTERF | 71 | 220 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | Pfam | mTERF | 239 | 336 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | PANTHER | CGI-12 PROTEIN-RELATED | 26 | 360 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | Gene3D | Transcription termination factor 3, mitochondrial | 150 | 355 | IPR038538 | - | |
Amo04g0390 | 364 | PANTHER | TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN | 26 | 360 | - | - | |
Amo04g0390 | 364 | SMART | mt_12 | 119 | 151 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | SMART | mt_12 | 255 | 286 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | SMART | mt_12 | 84 | 114 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | SMART | mt_12 | 287 | 321 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | SMART | mt_12 | 155 | 183 | IPR003690 | GO:0003690|GO:0006355 | |
Amo04g0390 | 364 | SMART | mt_12 | 188 | 216 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo04g0390 | Amo-Chr4 | 7669553 | 7674462 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Amo04g0390 | mTERF | 1.8e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo04g0390 | K15032 | - | gmx:102666739 | 356.295 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo01g3492 | 01 | 107540679 | 107546070 | Amo04g0390 | 04 | 7669553 | 7674462 | PCT | |
Amo11g2656 | 11 | 134715027 | 134721649 | Amo04g0390 | 04 | 7669553 | 7674462 | PCT | |
Amo04g0390 | 04 | 7669553 | 7674462 | Amo01g3492 | 01 | 107540679 | 107546070 | PCT | |
Amo04g0390 | 04 | 7669553 | 7674462 | Amo11g2656 | 11 | 134715027 | 134721649 | PCT |