Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0367 ATGCTTGGTCCTGAAACAGAACTTAAGATAAGTTTTGGCTACCAATGCAATGGCATTGCAGATATCTCGTGCAAGTCTATCAACGGCTACAAAATCCTTCCTTATTTCCCTAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCGTTAGCGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGGGAAGAAATCCTTCCTAGTTTGGACTCTCCTAAATCGTTTCGTAAGATACCCTCTTCGCCAAGTCTTTCGAAGTTGGACATACTATCATCTTCTCTCCATGGTAGTTTCTCAAACCTCAGTTGCAGTCCATCCACACAAAGTGATATGTTTGATTATGACGCTTGTATGGTGAGTGCTCCTTGCAAAAGTGAAGGATTTCTCAATGCTATGGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGGAATTTATGATGGCTTTAATGGCAGGGATGCAGCTGACTTTCTGGCCTGTACCCTTTACGACACTATCATATCTTATTTTAATATGCTGTATTTGGATTTGGAATCAGATTCTATCAAAGCTTCCAACAGTCTTGATTTGGGTGGATCATCTCAATATGAGTTGGATGAGCGTCAATCTCGTTCTCAGAAATCATTTTCACATGCTATTCTTGATAGCCTCCAACGTGCTCTCAATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGACCGTCCGGATTTAGTTTCTGTCGGATCTTGTGTTTTACTTGCACTTCTTCATGGGGAAAATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGTGCAGTATGGATGGCGGAATGAGTGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACTGATATTCATACTGTTGACAATGGAGCCGAAAGAGCTCAACTTCTTGCTGGTCACCCTGATGATCCCAAGGCCATCGTAGCTGGGAAAGTGAAAGGAAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATTCTTCGAGTGCGTGATCTCATAAGCCCACCATACATTTCCATTCAACCGTCACTAAATGTGCATAGAATCTCAAGTTCCGATCAATTTGCTATAGTTGCGAGTGATGGTTTGTTCGATTTCTTCAGCAATGATGAAGCAGTAGAGCTTGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTTAGCACGGAAGAGTTGATGAATGTTCCGGCCGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTGATTGTCATCATCCTTGGGATGAATCAACGGACGTCAAAGGCATCAACTTGCATCTAA 1476 0.4268 MLGPETELKISFGYQCNGIADISCKSINGYKILPYFPRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPKSFRKIPSSPSLSKLDILSSSLHGSFSNLSCSPSTQSDMFDYDACMVSAPCKSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDTIISYFNMLYLDLESDSIKASNSLDLGGSSQYELDERQSRSQKSFSHAILDSLQRALNQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGENLYTLNLGDSRAVLATCSMDGGMSGKERRMKAIQLTDIHTVDNGAERAQLLAGHPDDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISIQPSLNVHRISSSDQFAIVASDGLFDFFSNDEAVELAESYILSNPFGDPAKFLVEQLIARAADSAGFSTEELMNVPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0367 491 Pfam Protein phosphatase 2C 225 432 IPR001932 -
Amo04g0367 491 Gene3D - 117 487 IPR036457 -
Amo04g0367 491 SMART PP2C_4 124 476 IPR001932 -
Amo04g0367 491 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
Amo04g0367 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 213 490 - -
Amo04g0367 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 208 - -
Amo04g0367 491 CDD PP2Cc 146 478 IPR001932 -
Amo04g0367 491 PANTHER PROTEIN PHOSPHATASE 2C 2 208 IPR015655 GO:0004722|GO:0006470
Amo04g0367 491 PANTHER PROTEIN PHOSPHATASE 2C 213 490 IPR015655 GO:0004722|GO:0006470
Amo04g0367 491 SUPERFAMILY PP2C-like 147 479 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0367 Amo-Chr4 6881593 6883389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0367 4 491 PP2C-type Phosphatase Gene Family AT3G16560 63.673 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0367 - - gmx:102666789 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3478 01 107379236 107382018 Amo04g0367 04 6881593 6883389 PCT
Amo11g2647 11 134550361 134553236 Amo04g0367 04 6881593 6883389 PCT
Amo04g0367 04 6881593 6883389 Amo01g3478 01 107379236 107382018 PCT
Amo04g0367 04 6881593 6883389 Amo11g2647 11 134550361 134553236 PCT