Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0349 ATGGACGGCAACAAGGATGAGGCGCTGCGCTGCCTTCGAATAGCTGAGGAAGCGATCGCAGCCGGCAACAAATCCCGCGCCCTCAAATTCATCGGAATCGCTCAGCGGCTCAACCATAACCTCCCCGTCGATGATTTGCTGAACATGTGCGAGCACCTCGATTCTCAGTCCTCTGCGTCTTCTTCTTCTTCAGAACATAAAGGTAACGAAAATCGCGTTAAGAGCAAACCGAACGGTATATCGAAAACTGATGACGAGGGTTTGAACGAGGAGAGGAATTACACGGAGGAGAATGTGAAGTTGATTAGGGAAATTAAATTGAAGAGTGATTACTATGCGATCTTGGGAGTTGAGAAGAGTTGTTCGGTTGAAGAGATTAGAAAGGCGTATAGGAAACTTTCCTTGAAGGTTCATCCGGATAAGAACAAGGCACCAGGTTCCGAAGAGGCCTTTAAGAAGGTCTCAAAAGCATTTAAATGCTTGAGTGATGATAGTTCTAGAAGGCAGTATGATCAGACTGGATTGGTGGATGAATTCGAGTACAATCAGCAGTACAGCGTTCCGCGCCGGAGGAGGAGAACTGCAGCAAGCCGGGATTTCTTCGAGGATGATTTCGATCCGGACGAGATATTCAGGGCCTTTTTTGGACAATCTGATGTGTTTGGGAGGCAACATGTTTACAGGACAAGGGCAACCACCCATGATCATCATCATCAAAGACATGGTTTTCAGGGTGTTGCAGGTGGAACGGGGCTTAATATTATGCTCCTTGTTCAGTTGTTGCCGTTCTTGATCATTTTGCTGCTTGCTTACCTGCCATTCTCTGAACCTGAGTATTCTCTGTACAAGAATTACTCATACCAGTTTCCCAAGACCATAGAGAATTATGGGATTCAATATTTCGTAAAGTCTCAAGCTTTTGATCGTAACTATCCACAGGGGAGTGCTGCTCGCACTACCATTGAGGACAATGTTATAAAAGATTATAAAAATATGCTTCGGCGTTATTGTCAGATTGAGATTCAGAGGCGGAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGAAAAGTTGCAAAACTTTGGAGTAGTAGCCTGA 1098 0.4517 MDGNKDEALRCLRIAEEAIAAGNKSRALKFIGIAQRLNHNLPVDDLLNMCEHLDSQSSASSSSSEHKGNENRVKSKPNGISKTDDEGLNEERNYTEENVKLIREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQYSVPRRRRRTAASRDFFEDDFDPDEIFRAFFGQSDVFGRQHVYRTRATTHDHHHQRHGFQGVAGGTGLNIMLLVQLLPFLIILLLAYLPFSEPEYSLYKNYSYQFPKTIENYGIQYFVKSQAFDRNYPQGSAARTTIEDNVIKDYKNMLRRYCQIEIQRRSWNRNLPTPHCEKLQNFGVVA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0349 365 MobiDBLite consensus disorder prediction 54 91 - -
Amo04g0349 365 MobiDBLite consensus disorder prediction 67 91 - -
Amo04g0349 365 PANTHER AT29763P-RELATED 1 363 - -
Amo04g0349 365 Pfam Domain of unknown function (DUF1977) 275 344 IPR015399 -
Amo04g0349 365 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Amo04g0349 365 CDD DnaJ 110 163 IPR001623 -
Amo04g0349 365 Pfam DnaJ domain 110 171 IPR001623 -
Amo04g0349 365 PRINTS DnaJ domain signature 112 130 IPR001623 -
Amo04g0349 365 PRINTS DnaJ domain signature 146 166 IPR001623 -
Amo04g0349 365 PRINTS DnaJ domain signature 130 145 IPR001623 -
Amo04g0349 365 SMART dnaj_3 109 166 IPR001623 -
Amo04g0349 365 Gene3D DnaJ domain 107 228 IPR036869 -
Amo04g0349 365 PANTHER CHAPERONE PROTEIN DNAJ 49 1 363 - -
Amo04g0349 365 SUPERFAMILY Chaperone J-domain 109 222 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0349 Amo-Chr4 6160606 6162146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0349 4 171 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.168 1.30e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0349 K09518 - sind:105171531 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1471 14 24992637 24996066 Amo04g0349 04 6160606 6162146 hybridization