Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0316 ATGGATAAATCTTGGGTTAATAGTAAGATAATATGTCCGTGTCCAAGTTATGGGTTTCGAAAATTTTGTGTATCCATGAGTCCAAGCTCCCAATCAAGTTGTGTCACATCCTCACAACAAGCATCACATGCTGTCATGAGCACTACAAAGAAGAGGGTGCATGATGAAATGGTGGAGCAGAACCAGAAACAAATTGCTCATAGAAAATCCATTGATACCTTTGTCCAGAGAACATCTCAATATAGAGGCATAGGTGGACTGGGTATTGTGAGGCTCAAGCCCTGCTTTGATGTCACTGGTAGATATGGATGGAATATTGTGGCCAAGTTTAGAGGTAGTAACGTTGGCATTGGAGGAGTGAACTTGTCAGAGGACACTATAAGGGCTTGCTATTTATACTGCTTGAAGACATGTATCAAGTGCCTTGAGAAGGAATACAGAGCTCTTTGTAAAGTATATCATCTTTTGTTTTTTTCTAAAATTAGCTTTACTGTTTACTTTTATTCAGAGTTTATATGTTTACTTATTCTGCTGAATTAA 540 0.3815 MDKSWVNSKIICPCPSYGFRKFCVSMSPSSQSSCVTSSQQASHAVMSTTKKRVHDEMVEQNQKQIAHRKSIDTFVQRTSQYRGIGGLGIVRLKPCFDVTGRYGWNIVAKFRGSNVGIGGVNLSEDTIRACYLYCLKTCIKCLEKEYRALCKVYHLLFFSKISFTVYFYSEFICLLILLN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0316 179 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 84 - -
Amo04g0316 179 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT ISOFORM X1 18 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0316 Amo-Chr4 5530004 5530807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0316 20 136 AP2-EREBP Transcription Factor Family AT4G37750 35.948 5.19e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0316 K09285 - adu:107483558 140.969