Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0313 ATGAAAAAGAAGGAAAAAATTATAGTATCAGTAGTTGTTTCAGTTTCGCTCATCCTTGTGGCGGGAGTTGCTACCGGGATCATAGTGGCCGTTAATAACAAGAAAAGCAATGGCGCTGATGAAGTGCAAAACACTAAAGAAAGGTTCACGAGTCTCATGTGCCACAACACACAAGAGGATCAAAACCTCTGTCGCAAGGTTCTAAGCCAAGTTGATGGGTCCTCTTCTTCTGACCCGGAAGCATACATCGATGCCGCCGTGAATGATATCAGAGACGGCGTCACCACCGCTCTAAAGATGATGACGACTAAGGAGGAGTTCTCCAAAGATGACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAATCCGCATTGAGCAGCCTCGACCTTTTTAGCAATGTGCTTCGCAGCAATCACGACATTAACTCCTTGCAATCGCAAACTCCCGACCTCAAGAACTGGCTTAGCGCCGTTATCTCATATCAGCAATCTTGTGTTGACATTTTTGAGGATCAAAATGAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCAAGAGTTTGGATCGCGTTGAGAAGGTTTCCATCATAACTCTCGATATTGTTACTGGTTTCGCTAAGATCATTGAAGATCTTGGTCTGCATGTGGAAATGAAACCCATTGCTTCTTCTGGACGTGTTCTTCGCGAAGAGCTGTTGGCAAAGGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAACTTTAGGACGGTTCAGGATGCAATTAACTCGTACATTATCTATGTTAAGGCGGGGATTTATAAGGAGAATTGTACAGTTCCATCTCATGCAATGAACATTTTCATGTATGGCGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGTCACCCATAACCTCAAGACCATGTTTACTGCCACTTTCGGCACCATAGCATTCACCTTTATTATTATATGA 996 0.4287 MKKKEKIIVSVVVSVSLILVAGVATGIIVAVNNKKSNGADEVQNTKERFTSLMCHNTQEDQNLCRKVLSQVDGSSSSDPEAYIDAAVNDIRDGVTTALKMMTTKEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDINSLQSQTPDLKNWLSAVISYQQSCVDIFEDQNEGERKIKEQLQSKSLDRVEKVSIITLDIVTGFAKIIEDLGLHVEMKPIASSGRVLREELLAKDVKFHVPNVVVAKDGSGNFRTVQDAINSYIIYVKAGIYKENCTVPSHAMNIFMYGDGPTKTIITASMSNVTHNLKTMFTATFGTIAFTFIII* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0313 331 Pfam Plant invertase/pectin methylesterase inhibitor 53 205 IPR006501 GO:0004857
Amo04g0313 331 CDD PMEI-like_3 52 211 - -
Amo04g0313 331 Pfam Pectinesterase 247 329 IPR000070 GO:0030599|GO:0042545
Amo04g0313 331 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 205 IPR006501 GO:0004857
Amo04g0313 331 SUPERFAMILY Pectin lyase-like 247 328 IPR011050 -
Amo04g0313 331 SMART PMEI_2 45 205 IPR006501 GO:0004857
Amo04g0313 331 Gene3D - 244 330 IPR012334 -
Amo04g0313 331 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 209 IPR035513 -
Amo04g0313 331 PANTHER PECTINESTERASE 12 329 - -
Amo04g0313 331 PANTHER PECTINESTERASE 12 329 - -
Amo04g0313 331 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0313 Amo-Chr4 5432187 5433442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0313 53 321 Carbohydrate Esterase AT2G26450 32.753 6.15e-30 118