Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0287 ATGGTTCTTTTTCCATCTCTTCTCAATGGATTTGCAAGAAAGAAAAGTTGTCCAAACGATGATGACAATGATGAAAGGAAAGCCGTGAAAGCACTCGCGAAGGAAGCAAGGAAGAATGGCTTGTTATTGAGTTCATCAGGAACTGTTAAGTCTTCCAAGGCCAACAACTTTGCCTCAGTTTTCACAAAGAAGGGCCAGAAAGGAGTCAATCAAGATCGCCTYATTGTTTGGGAGGAATTTGGTTGGCAAGAAGACATGATATTGTGTGGAGTTTTTGATGGACATGGCCCTTGGGGACACTATGTGTCCAAAAGTGTCATGAAACTTGTCCCTGCCTCTTTGCTATGCAATTTGAAGGAAAATCTTGCTGCAACATCTCTTGACCTGAATTACAAGATGGAAGCAGATAGGAGGAACCACCATGAATTTGACATATGGAAGCARGCATGCATAAAGACTTGTGCTGCTGTTGATCATCATCTAAAGCAGAATACTGGGATTGATTCCTTTCAAAGTGGTACTACAGCTTTGACAGTTATCAAACAGGGTGAAGATCTGATTATATCAAACTTAGGAGATTCAAGGGCAGTATTGGCAACAACTTTAGATGGTGGCACACTAAGTGCCCTTCAGCTTACAACTGACATGAAGCCAAATTTACCTAAGGAGGCAGAGAGGATAATGGAATCAAGAGGGAGGGTGTTTTGTCTAGAAGATGAGCCAGGAGTGTATAGGGTGTGGATGCCAAATGGTAAAACACCAGGACTTGCAATATCAAGAGCRTTGGGTGATTATTGTGTCAAGGATTTTGGACTAATCTCTGTGCCTGAAGTCACTCAAAGGAAGCTAAACTCTAGAGATCAATTTCTCATCTTGGCTAGTGATGGGGTATGGGATGTAATTTCGAACCAAGAAGCAGTGAAAATCGTTGGTTCAAGTGAAGAGAAAGGAAAAGCTGCCGAGAGATTGGTGAAATGCGCTAAGCATGAATGGAAGAGGAAGCGAAGAGGCATTGCCATTGATGACATCTCAGCTATCTGCCTCTTCTTTCAGCCCCATAATAACTTTCTCACATCACCATCATATAATGTATAG 1095 0.4192 MVLFPSLLNGFARKKSCPNDDDNDERKAVKALAKEARKNGLLLSSSGTVKSSKANNFASVFTKKGQKGVNQDRLIVWEEFGWQEDMILCGVFDGHGPWGHYVSKSVMKLVPASLLCNLKENLAATSLDLNYKMEADRRNHHEFDIWKQACIKTCAAVDHHLKQNTGIDSFQSGTTALTVIKQGEDLIISNLGDSRAVLATTLDGGTLSALQLTTDMKPNLPKEAERIMESRGRVFCLEDEPGVYRVWMPNGKTPGLAISRALGDYCVKDFGLISVPEVTQRKLNSRDQFLILASDGVWDVISNQEAVKIVGSSEEKGKAAERLVKCAKHEWKRKRRGIAIDDISAICLFFQPHNNFLTSPSYNV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0287 364 Gene3D - 44 352 IPR036457 -
Amo04g0287 364 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 354 - -
Amo04g0287 364 CDD PP2Cc 56 350 IPR001932 -
Amo04g0287 364 SMART PP2C_4 48 348 IPR001932 -
Amo04g0287 364 Pfam Protein phosphatase 2C 138 327 IPR001932 -
Amo04g0287 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 354 - -
Amo04g0287 364 ProSiteProfiles PPM-type phosphatase domain profile. 57 350 IPR001932 -
Amo04g0287 364 SUPERFAMILY PP2C-like 50 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0287 Amo-Chr4 4862030 4864922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0287 1 351 PP2C-type Phosphatase Gene Family AT3G05640 57.865 7.62e-150 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0287 - - aip:107636155 530.406