Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0275 ATGGCCTTTTCTCGGACCCTAGAACATGAATCTCCCTCTCTGGTCTTCACAGTCCACAGAAAACAACCAGAGTTAGTAGCTCCTTGTAAGGCCACACCCCATGAAATCAAGMTTCTATCCGACATTGATTCGCAAGCCGGCCTTCGCGCCCAAATTCCGATCATACAATTCTACTGTAGTGAGCCTTCAATGGAAGGAAAAGACCCAGTTGAAATCATTAGGAATGCAATTGCACAAGCACTTGTGTTCTATTATCCACTTGCTGGTAGGCTTAGGGAAAGGCCTGATGGAAAACTCATGGTGGATTGTAAYGAAGAAGGARTTATGTTCATTGAAGCTGATGCTGRTGTCACACTTGATCAGTTTGGKGATGCTCTTGAACCTCCATTTCCATGCTTTGAAGARCTCCTCYATGATGTTCCCGGTTCAGAAGGAGTTATTGATACTCCCCTTCTTCTTATTCAGGTATCAACCCTCCGATCCCTCCTCCCGGAAAGCCTCTCCAGTGCAACCACCTTCCAAATACTCACCGCATTCGTATGGCAATGCCGAACCAAAGCATTGCGTTTCAACCCAAACGACTACGTTAGAATGATGTGCATAACCGATGGGCGCGCGAAGTTTAACCCTCCCATTCCAAACAGTTACTACGGTAACTGCTTGGTGCTCCCGGCAGCAGTTACAACCGCCGGGAAGCTGACCGAGGGCACGCTTGGATACCCCGTGGGGCTTATAAAAGAGGCAATTGAGAAGGTTGACGAAGAGTATATACCATTCTGTGGACGGATTTTTATGGTTAACAAATGGATGAGGCCTTTGTTTACTACAGTAAGGTCTTGCGTTGTGTTGGATACTACTTATGCTGGGTTCAGAGGCGTGGATTTTGGGTGGGGTAAGGCTTTGTACGGAGGGTTAGCGAAACCTGGTGCTGGTGCATTTCCTGCGGTGAATTTTCATGTTCCTAGCCAGAATGAGAAGGGAGAAGAAGGTTATATTGGGTTCTGGACTTGGTTTGCCTACTCAGGCTTTGAAGGCTTTTGCCAAAGTCATGGATGA 1056 0.4678 MAFSRTLEHESPSLVFTVHRKQPELVAPCKATPHEIKXLSDIDSQAGLRAQIPIIQFYCSEPSMEGKDPVEIIRNAIAQALVFYYPLAGRLRERPDGKLMVDCNEEGXMFIEADAXVTLDQFGDALEPPFPCFEELLXDVPGSEGVIDTPLLLIQVSTLRSLLPESLSSATTFQILTAFVWQCRTKALRFNPNDYVRMMCITDGRAKFNPPIPNSYYGNCLVLPAAVTTAGKLTEGTLGYPVGLIKEAIEKVDEEYIPFCGRIFMVNKWMRPLFTTVRSCVVLDTTYAGFRGVDFGWGKALYGGLAKPGAGAFPAVNFHVPSQNEKGEEGYIGFWTWFAYSGFEGFCQSHG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0275 351 Pfam Transferase family 18 159 - -
Amo04g0275 351 Pfam Transferase family 170 309 - -
Amo04g0275 351 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 157 332 - -
Amo04g0275 351 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 160 - -
Amo04g0275 351 Gene3D - 17 158 IPR023213 -
Amo04g0275 351 Gene3D - 159 337 IPR023213 -
Amo04g0275 351 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 12 160 - -
Amo04g0275 351 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 157 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0275 Amo-Chr4 4540639 4557503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0275 169 328 Monolignol Biosynthesis Gene Families AT5G48930 27.059 2.51e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0275 K19861 - aip:107618048 330.487