Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0242 ATGGCCATGGCCTTGCATGACCATGTCTTCTTCTACATCTTTGTCATCATCTCCGCCGCGCCATTATCGCTCTCTCAGCCGCAAGCCGCCTCCTCCTGCAACGGAATATTCCTTTCTTACACTTACACCAGCGGCTACCGCCTGCCGCCGAACACGTCCGACACCGCGGACCAGCCATACCGGTTCACGTCGGAGCTGACGGTGCTAAACTACGGCCTAGAGGATCTGAAGTCATGGAAGGTGTTCGTGGGTTTCCGGCACCGGGAGTGGCTGGTTTCCGCGTCGAACGCGGAGCTGGCGGACGGCACAGGGCTCCCTGCTGCCGTCGGAAACGGGACAGTTTTGGAGGGGTCCGAGGTGAGGGACTTGAAGACGGCAGCGGAGACCGCGGGGGACTTAAAACAGATGATGCTAACGGTGGGCATGGTGGGGACGGTGTTTGGGGTGGCGCCACCCAATGTTCCCATGCCTTCCACCATTAGGCTCTCTAATGATGGTTTTATTTGTCGTAAACCCACTTCTCAAGGTAACAATGAGACACATACATGTTGCACAGTTGATCCCAATTCCAAAACAAACACACCCACAGATGAACAAGAATTCCCACTCCCTCAGAAAGGTGGTGACCTTAGCATAATCTATGATGTCACAAAAACATATGAATCCAATTACTGGGCAGAGGTCACAGTTTCAAACAACAACCCCATTGGCCGTCTTGACCATTGGAAACTCAGCTGGGAATGGATCAATGATGAGTTCATATACACAATGAAAGGTGCATATCCATCAAACGTTGATTCTTCTGAATGTATCTTTGGTTCACAAGGTGAGTACTACAAGAAACTTGACTTTGCCGATGTGTTGAACTGCGAAAGAAGGCCAACCGTAGTTGATCTCCCTCCAACAAGGTTCAATGATTCAAAACTTGGTAAAGTCCCATTTTGCTGCAGAAATGGTACATTGTTGCCACCCACAATGGATCCTAGTAAGTCAATTTCAAGGTTCCAAATGCAGGTCTTCAAGATGCCTCCAAACATCAATCGTTCCCACCTTGCGCCACCTAGGAACTGGAAGATAAGTGGTGAGGAACTCAACCCTGAATACCAATGTGGGAATCCTGTTAGGGTGAGTCCTAGTGAGTCTTTGGATCCAACAGGTTTGCCATCAAATACATCTGCAATTGCAAGTTGGCAAATTCTCTGCAACATAACAAGGAACACAAGAAAAAGCAAATGTTGTGTCTCATTTTCAGCTTTTTTCAATGAATCTGTTGTTCCCTGCCAAACATGTGCATGTGGATGCTCCGCGAAGTCAGAGAGGACGTGCAGTGTGGCTGAACCGGCTGTGCTGCTTCCCCCGGAGGCACTTCTTGTTCCATTTGAGAATAGAACAAAAATGGCTCATACTTGGGCTGAAAGAAAGCATCTATCAGTGCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATCAACTGGCATGTGAATACAGATTACCGGCGAGGTTGGACTGCAAGGATCACGCTTTTCAACTGGGGCGAAACTGATTTCGCAGACTGGTTTGTCGCAGTGGAAATGGATAAAGCGGCCCCTGGTTTTGAGAAAATGTACTCATTCAATGCTAGTTCATTAGACAAAGTGAAGAACACAATATTCATGCAAGGAAAGGAAGGATTGAACTTCCTTGTAGCCGAAGCAAATGGATCCAACCCAAAAAAAGATCCGAAGGTGCCCGGGAAACAACAATCCGTGATCTCATTTAGAAAGAAAAATACTCCTGGAATCAAAGTGGTAGATGGTGATGGATTTCCCAATAAAGTATTCTTCAATGGTGAGGAATGTTCTCTTCCTTTGGTATATCCAAGCAGTGGTTTCAGGAATGAGTTTTCTTTTGTTCCCGTGTTGCTCCTGATGTTGTTGCCAATCATATGGATGTGGCAATAG 1947 0.4725 MAMALHDHVFFYIFVIISAAPLSLSQPQAASSCNGIFLSYTYTSGYRLPPNTSDTADQPYRFTSELTVLNYGLEDLKSWKVFVGFRHREWLVSASNAELADGTGLPAAVGNGTVLEGSEVRDLKTAAETAGDLKQMMLTVGMVGTVFGVAPPNVPMPSTIRLSNDGFICRKPTSQGNNETHTCCTVDPNSKTNTPTDEQEFPLPQKGGDLSIIYDVTKTYESNYWAEVTVSNNNPIGRLDHWKLSWEWINDEFIYTMKGAYPSNVDSSECIFGSQGEYYKKLDFADVLNCERRPTVVDLPPTRFNDSKLGKVPFCCRNGTLLPPTMDPSKSISRFQMQVFKMPPNINRSHLAPPRNWKISGEELNPEYQCGNPVRVSPSESLDPTGLPSNTSAIASWQILCNITRNTRKSKCCVSFSAFFNESVVPCQTCACGCSAKSERTCSVAEPAVLLPPEALLVPFENRTKMAHTWAERKHLSVPNPMPCGDNCGVSINWHVNTDYRRGWTARITLFNWGETDFADWFVAVEMDKAAPGFEKMYSFNASSLDKVKNTIFMQGKEGLNFLVAEANGSNPKKDPKVPGKQQSVISFRKKNTPGIKVVDGDGFPNKVFFNGEECSLPLVYPSSGFRNEFSFVPVLLLMLLPIIWMWQ* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0242 648 Pfam COBRA-like protein 224 404 IPR006918 GO:0010215|GO:0031225
Amo04g0242 648 PANTHER COBRA-LIKE PROTEIN 7 1 644 - -
Amo04g0242 648 PANTHER COBRA-LIKE PROTEIN 7 1 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0242 Amo-Chr4 3834632 3838009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0242 17 631 COBRA Gene Family AT4G16120 61.295 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0242 - - mtr:MTR_2g034950 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1371 14 22809576 22812791 Amo04g0242 04 3834632 3838009 hybridization