Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0238 ATGGATCCATCAATTTGTGAAGAAGGATCATATGACACTTCATATGATGTGCGTAATTATTCTAAGTCCACCGAAGTCAATGTCCGGTGTTTGAGTGAAGATGATACTCAATATGTAGAGAAGCAAATGAGAAAGCAAGTTTATGATCCAATTTGTCTTGATGCATTTGAGGATCATTCGAAATGGATATTGGAAGATTCACCACCATTTTTAACTCTTGAAGAAGTTAATGCTTTACGAAATGATCTTACAAATATGTCTCTTCAATCACCTTTAGATGATTTAGCATTATCTATAATGCTAGATCAATTGGATTTGAAAGATGATCGGGATGATGATGGAGCTAATAATTCTATGGAAAATGCAAATCAAAATGAAACCAATCAGGATGAAAAAAAATCTGTAGATATTATTGAGTTGAAGGATGATGATACGGAATTAAGTCATAAGTTATCGGATCACACTGGAATTCAACTAGAAAAAATATCATACGTAGAATTACGATTTATTTTGTTGCAGTGGGCACAAGAATTCTATTCTAATTATGCAAAGAAAGTTAGGTTCATCACTAAGATTAGGAACACCAATTTTGACAAGACAAAAAATGAATTAAGGATATCCATTAACCTATCGATACATTATAATCGTGAAGGTTATCGGGAGTCTCGAGTGAAGACAGTATCTCGGGTAAAGAAAATAACAACCGCAAGATGCAGAGCAATGATGTACGTGATGTTTGATAGGCAGAAGGTTAATTGGATGGTGTCAAAATTAGAATTGAAGCATACTCATCCGTGTTTTTCTAAGCAATCTGTCCATTACCATGAACACATAGAACTAACCATGCATGCCAAGTGTGTGATTGAGGACAACGATGAAGTTGGCTGGAATAAGGAGCAAAAAGAACTAGAGGACGATGATATAGACTCTAAAGGAGTTGTCCCCTGCTCATCCAGCTCTACAATTGAAAGACAATTTCAACACGAGTACACAAGCTAA 999 0.3524 MDPSICEEGSYDTSYDVRNYSKSTEVNVRCLSEDDTQYVEKQMRKQVYDPICLDAFEDHSKWILEDSPPFLTLEEVNALRNDLTNMSLQSPLDDLALSIMLDQLDLKDDRDDDGANNSMENANQNETNQDEKKSVDIIELKDDDTELSHKLSDHTGIQLEKISYVELRFILLQWAQEFYSNYAKKVRFITKIRNTNFDKTKNELRISINLSIHYNREGYRESRVKTVSRVKKITTARCRAMMYVMFDRQKVNWMVSKLELKHTHPCFSKQSVHYHEHIELTMHAKCVIEDNDEVGWNKEQKELEDDDIDSKGVVPCSSSSTIERQFQHEYTS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0238 332 MobiDBLite consensus disorder prediction 313 332 - -
Amo04g0238 332 MobiDBLite consensus disorder prediction 301 332 - -
Amo04g0238 332 MobiDBLite consensus disorder prediction 109 135 - -
Amo04g0238 332 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 107 274 - -
Amo04g0238 332 Pfam FAR1 DNA-binding domain 177 267 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0238 Amo-Chr4 3759261 3764174 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g0238 FAR1 1.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0238 - - aip:110264964 239.195