Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0216 ATGATGAGTGCATCAGAAAACCCTAGACTTCAACATCATAACCCTTATTCTGCGGTAAAAGGTTACTCTCCCTCTCCCTCATCTACAACACCCAAGCTCTTCGGTTTCCCTTTAACCACAACTTCATCAAGCTGCGAATCCATGGCTAGTAAGAGGTTCAAATGTGACTTTTGTTACCGCGAATTCGCAAATTCACAGGCACTAGGTGGCCATCAAAACGCTCACAAGAAAGAGCGTCGAAGAGCCACCTTAGCGCGCTTTCACCAACATTCGATGCCCTTTGTCTTTTTTCCTTCATCATCAGGATCTGTAGTTTCTCCGCATGGAAGGGCCCCACACCTTGGGATTTCTGGCGGAGAACCTGATCCTGATGACGAAGAAGATCTATTAATTCCCGTTGTTGTGACAAATGAAGGTGATGGTGCAAGACAAAAAGGACCCTTCTTTGTGGAACAAGTACACAAGAATAGTGGTGATGATGATGTTGATCTTAACTTGAGGCTATAG 507 0.4497 MMSASENPRLQHHNPYSAVKGYSPSPSSTTPKLFGFPLTTTSSSCESMASKRFKCDFCYREFANSQALGGHQNAHKKERRRATLARFHQHSMPFVFFPSSSGSVVSPHGRAPHLGISGGEPDPDDEEDLLIPVVVTNEGDGARQKGPFFVEQVHKNSGDDDVDLNLRL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0216 168 MobiDBLite consensus disorder prediction 1 24 - -
Amo04g0216 168 Gene3D Classic Zinc Finger 33 93 - -
Amo04g0216 168 SUPERFAMILY beta-beta-alpha zinc fingers 50 80 IPR036236 -
Amo04g0216 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Amo04g0216 168 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Amo04g0216 168 PANTHER ZINC FINGER PROTEIN 5 24 168 IPR044299 GO:0010090
Amo04g0216 168 PANTHER ZINC FINGER PROTEIN 8-LIKE 24 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0216 Amo-Chr4 3503838 3504344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0216 23 106 C2H2 Transcription Factor Family AT5G06650 37.755 2.18e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0216 - - ahf:112740291 314.309