Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0125 ATGGCAATGGAAGCTGCTGAGGCTTCAACCACACCACAGGTGGCGCTCGCTGATACTGACATCAACTGGCACAGGCTGGACAAGACCAAGTTCCATGTAATTGGTGCCATTCTCTTCACTGCTCAATCAGCTTTGCTTCATCCAACAGCAGTGGTTAAGACAAGAATGCAAGTAGCTGGTTCTGGACTCTCTCAAATGCGRGGAATGTCGGTGTTCACTCATATTCTAAGGAGTGATGGTGTTCCCGGAATCTTTAGAGGTTTTGGCACTTCTGCTATTGGATCAATGCCTGGGAGGGTCCTAGCTTTGACGTCTCTAGAGATGTCGAAAGACATTATGTTGAAATACACACAAGGTAGTGATATACCAGAAGCTTCAAGAATCGGCCTTGCGAATGGTGTGGCCGGCATGTTTTCCAATCTGGTGTCTTGTGTATACTTCGTGCCTTTGGATGTGATCTGCCAGAGGTTAATGGTACAAGGTCTTCCAGGAACGGCTCCTTGTCGAGGACCATTTGATGTTATACGTAAAGTTTTCGAGGCCGAGGGTTTCCGAGGCTTGTATAGAGGTTTTGGATTAACAGCCATAACTCAGTCACCGGCATCTGCACTTTGGTGGGGTTCATATGGCGCGGCACAACACATAATTTGGAGGAGTTTGGGCTTCAAAGATGATGCAGAGAACAAACCTTCACATTTTCAAATGGTGACGGTTCAAGCTACAGCAGGGATGGTGGCCGGTGCGTGTTCGTCGGTTATCACTACTCCAATAGATACAGTAAAAACACGCCTTCAGGTTATGGACAACTACGGTTCCGGAAGACCATCGGTGCTGAAGACAACAAAGACTCTCCTTAAAGAAGATGGCTGGTGGGGATTTTACCGGGGGTTTGGACCTCGATTTCTAAACATGTCACTTTATGGAACAACGATGATCGTTACTTATGAACTGATAAAGAGATTGTCAGTACAACCGAGTTTGAGGTCCTTAGCTTAA 996 0.4649 MAMEAAEASTTPQVALADTDINWHRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQVAGSGLSQMRGMSVFTHILRSDGVPGIFRGFGTSAIGSMPGRVLALTSLEMSKDIMLKYTQGSDIPEASRIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGTAPCRGPFDVIRKVFEAEGFRGLYRGFGLTAITQSPASALWWGSYGAAQHIIWRSLGFKDDAENKPSHFQMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTTKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPSLRSLA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0125 331 SUPERFAMILY Mitochondrial carrier 25 317 IPR023395 -
Amo04g0125 331 Gene3D Mitochondrial carrier domain 33 324 IPR023395 -
Amo04g0125 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 321 IPR018108 -
Amo04g0125 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Amo04g0125 331 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Amo04g0125 331 Pfam Mitochondrial carrier protein 238 322 IPR018108 -
Amo04g0125 331 Pfam Mitochondrial carrier protein 34 116 IPR018108 -
Amo04g0125 331 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 324 - -
Amo04g0125 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 112 IPR018108 -
Amo04g0125 331 PANTHER OS01G0329400 PROTEIN 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0125 Amo-Chr4 2125482 2142414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0125 18 321 Chloroplast and Mitochondria Gene Families AT5G15640 50.654 4.99e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0125 K15121 - gmx:112997745 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1240 14 19852799 19855343 Amo04g0125 04 2125482 2142414 hybridization