Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0124 ATGGCATTTTCAGATGCTTATTTTCCTACAGCTCCACCTCTCAGTAAGTATGATGTCTTTATCAGTTTCACTGGTAAGGACACACGTAACGGTTTCACTAGTCATCTCTATTCTGCTTTGTGCAGAAACCAAATCGAAACATTCATAGACAACAGAATTGAGAAAGGTGGCGAGATCTGGGAAGAACTCGTGGAAGCCATCAGAGACTCGATGGTGTATCTGGTCATCTTCTCTGAACACTATGCCCACTCCAAGTGGTGCTTGTGGGAGCTCGTTGAGATCATGGAATGCAAGAACAAGAAGGAAGACTGCCATGTTATTCCTGTCTTCTACATGATCGAACCAAGCCATGTTCGGAAGCAGACCGGAAGCTACTATGGTGTGTTTGAGGATTACGAGAGAAATTTGGACCCTGGCCTTGTGCGCCAGTGGAGGAAGGTACTCTTTGATGCAGCCAATATTGCAGGCTTCGAATATCATGGTCACCATAGCAGGACTGAATCTAACCTCATCGAAGGCATAATTCAAATGATTCTTCGGAAATTAAATCGCAAATATAGAAGTGAAGTCAGAAGTCCTTTTATATATGACCAAAACTACGCATGCATTGAATCTGTATTGACCCATTCAAAGGAAGTTCGAACCATTGGGATATGGGGCATGGGGGGTATAGGAAAAACAACAATTGCCACGGCTATCTTTCAAGAGTTCTCTCCCTTATATGAAGGTAGTTGCTTCTTGGCAAATGTAAGAGAAGAATCAGAAAGGCATGGCCTCAGTTACATATTCACTAGACTTCTTTGCGAGTTGCTACAAGAAGAGGTTTATATTAGCACTCCCAAGATAGTGTCCTCTGCTATTGTGCGCAGATTGAGGCGTAAGAAGGTTTTCATTGTGCTTGATGATGTAAATACTTCTGAGCTTCTGGAAAATTTGCTTGGAGTTGGACATGATTATCTTGGAGCTGGTAGCAAAGTTATTGTTACAACCCGAGATAAGCATGTTCTTCTGAGTAGATCAATTGATCACATTCATGAAGTCATGCAAATGAATGATGAGAACTCTCTCAAACTATTTAGCTTGAATGCCTTCAATAGAATCCATCCTCCCGATGAAAATGGATATTTGGAGCTATCAAAAAGGACACTTGCCTATGCCAAAGGGCAAGAGAAAGAGAAAGTAACAACCATATTGAATAAGTGTGGTTTCTACGCAGATATTGGAATAAGAAATCTCTTAGACAAGGCTCTTATATCAATAGCTATGAACCAAAGCATACAAATGCATGACTTGATACAAGAAATGGGTCACAAAATTGTTTGGGAAGAATCTGTTGAGAATCCAGGAGGACGCAGTAGAGTGTGGAATGCTGATGAAGTTTGTGACATACTGAAAAATGATAAAGGAACTGATGCAATTGAAAGCATATTCTTGGATTTGACTCAAATCAAAGATCTAGAAATAAGCACCCATGCCTTTAGAAAAATGCTTAACTTAAGGCTACTTGCTTTTGCAAGTGGTAATATTAGTTTTGGTGGGAAGAGAATTACTAACACTTCAAGTATTCCAACAAATATGGTATTGTCTGATAACTTGAGATATATTCAGTGGGATGGATGTCCACTGAAGTCTCTATCATCTAGCTGCTGGCCTACCAAGCTTGTTGAGCTTTCTATGACTTACAGTGATGTTGAGAAACTTTGGGATGGTGCACAGGTATGCATGATAAAATATGGCTTGTTGGGTGTGATAGCTTGCGTCATATTCACCCTTCTATTTTCTGTCTCCAAAAGCTTGATGAGTATATGCAGCAATAAGTGTTCACCCTCTCTTCGATCACTGGTGGCGTATGGTTGCCCCAATCTCCAAGAGTTCTCAGTCCCAATGTCGAGAGATCGTTCTGGAATTAATTTGCATCTAAGACTAACTGCTGTGGAACGATTACCACCATCAGTTTTTCATCTTAGAAATCTTCAACACTTCTCATTTGCAATCAGTGATGGTCTTATGGATCTTCCTTCAAATTTTGCCTACCAAATCATGCTTTCTGACCCTACCAAGCATGAATATAACACTGCAATCACCTTACATAAAGTACTACCTAGCCCAATCTTTCAATCTGTAAGGCGTCTAATTTTTGATAATTGTTGTAGCTTAACTGAAATCCCAGAAAATATCTCTCTGTTATCATCATTGGTCCACTTAAACCTATATCATTGCACCAATGTCATAAACTTACCCGAAAGCATTAAGTATCTTCCACGACTCCAGGTTCTTAGTGTATATCAATGCGAAATGCTTCAACTTATACCAATTCTTCCACCTTCTCTTAAACGCCTTAGGGTGTGGGACTGCCAAGCTCTAAAGACAGTATTGATCAGTGAATCACAGAGGAAAGATGAGGGTACTTTTATATTCCTTAACTGCATAAATTTGGATGAAGATTCATACAGTGCCATTTTAAGAGATGCTATTGTCAGGCCAGAGGTTGGGACACAATCACCATTAGCATCAAAACTCGAAAAGCAAGAAGATGCTTGCATCATTCTCGATCGTGATTGTTATGTAAATGTTGGCGAGACTTGTTGTTTCTTACCAGTTAGACACAATAAACTTCTTGATGAATTGTTCCATGAACACTCCACAGAAGCTTCTATAAGTGTTGAACTGACTTCAAGTTCCAAATTGTCTGGCTTCCTTTTGTACTTGGTTCTCTCTCAAGCACAGTTGTGTGACATTGAAGGACAGATATTGTACAACGTTGATGACTTCTTAAGTTTTGGATGCGAGTGCTACTTGGAAACAAGTTGTGGCGAAAAACTCCATACAAGAAGCTCGTCTGTGATACAATGGCACTGGGATCAGCTATATCACAGGGTGAATATCAAGTCGGATCATGTATTATTATGGTATGATGAAAAATGTTGCGAGAAGATAATCGAAACAATCAATGGCAAGAGATCCTCTTACAGCGCGAAACTTGCATTTAAATTCTTTGCTGGAATTGCTAATAAAATGGAAACAGTGATAAAAGGGTGTGGCATCCGCTGGATATATCAAAATGTGGAGGAAGAATCAAGAGAGCGTAAATCCAAAAGAAACAGGGAAGTTTATGAGTCAGTAGACATTGCATTCCAGATTGGACAAGGTTCTGAATCTCACCAGCAAGAACCAATTCCTCCAACCAAAAAGTTTAAGCAAAGTTTTCTGCTGACGTCAGCCTCATCAATTGTTGAAGCAGAAGCGGCTGAGGACCTGAGCCTACACAAAACCAATGTCATAGGCTTACCTGAAAGCATTAAGTTTCTTCCACAACTCAAAGTTCTTAAAGTTTGTCACTGTGAAATGCTGCAATTTATACCAGTGTTTCCACCTTCTGTTGAATGCTTAAGTTTGGAAAGTGAAACACCCAAACAACATGCAGGTACTTTCATATTCCTGGACTGCATGAATTTGGATGAAAATTCATGCAATGCCATTCTGAAAGATGCTATTGCTAGGACAACATGTTGGATGGAAACAATACTAACAACTGAATGGAAGAACAACGAGAGAATGAAGATCATAATTACCCAAGTGCCTTCAAGTTCTAACTTGTGTGGGTTCATGTTCTACCTGGTTCTTTCTGAAGCACAATCATGCATCATTGATGAACTTGTTATTAACTTTGTGTGTGAATGTTACTTGGAAACAAGTTGGGGAGAAAGTATCCATGTAGCAAGTTCCGTTGTCGTCGAATGGGGCTGCGACATGACCATTGGATACCAGCTGAATGTTATGCAGGATCATGTGTTGTTATGGTATGATGAAGAATGTTCAAAGCAGATAATGGAAACAGTTAAAGGAAGAGAAGCTAATACTGAAAAGAAGTCCCATTTTAATGCAAAGATGACAGTTAAGTTCGTTGCTCGGCTACCAAACAAAGAGGAAGCAATGGTAAAAGAGTGTGGCATTCGATGGATATATTCAAATTTGGAGGAAGGATCATCAAGAGAGCAGAGATCCAAGAGAATCATTGGAAGTTAA 4026 0.3967 MAFSDAYFPTAPPLSKYDVFISFTGKDTRNGFTSHLYSALCRNQIETFIDNRIEKGGEIWEELVEAIRDSMVYLVIFSEHYAHSKWCLWELVEIMECKNKKEDCHVIPVFYMIEPSHVRKQTGSYYGVFEDYERNLDPGLVRQWRKVLFDAANIAGFEYHGHHSRTESNLIEGIIQMILRKLNRKYRSEVRSPFIYDQNYACIESVLTHSKEVRTIGIWGMGGIGKTTIATAIFQEFSPLYEGSCFLANVREESERHGLSYIFTRLLCELLQEEVYISTPKIVSSAIVRRLRRKKVFIVLDDVNTSELLENLLGVGHDYLGAGSKVIVTTRDKHVLLSRSIDHIHEVMQMNDENSLKLFSLNAFNRIHPPDENGYLELSKRTLAYAKGQEKEKVTTILNKCGFYADIGIRNLLDKALISIAMNQSIQMHDLIQEMGHKIVWEESVENPGGRSRVWNADEVCDILKNDKGTDAIESIFLDLTQIKDLEISTHAFRKMLNLRLLAFASGNISFGGKRITNTSSIPTNMVLSDNLRYIQWDGCPLKSLSSSCWPTKLVELSMTYSDVEKLWDGAQVCMIKYGLLGVIACVIFTLLFSVSKSLMSICSNKCSPSLRSLVAYGCPNLQEFSVPMSRDRSGINLHLRLTAVERLPPSVFHLRNLQHFSFAISDGLMDLPSNFAYQIMLSDPTKHEYNTAITLHKVLPSPIFQSVRRLIFDNCCSLTEIPENISLLSSLVHLNLYHCTNVINLPESIKYLPRLQVLSVYQCEMLQLIPILPPSLKRLRVWDCQALKTVLISESQRKDEGTFIFLNCINLDEDSYSAILRDAIVRPEVGTQSPLASKLEKQEDACIILDRDCYVNVGETCCFLPVRHNKLLDELFHEHSTEASISVELTSSSKLSGFLLYLVLSQAQLCDIEGQILYNVDDFLSFGCECYLETSCGEKLHTRSSSVIQWHWDQLYHRVNIKSDHVLLWYDEKCCEKIIETINGKRSSYSAKLAFKFFAGIANKMETVIKGCGIRWIYQNVEEESRERKSKRNREVYESVDIAFQIGQGSESHQQEPIPPTKKFKQSFLLTSASSIVEAEAAEDLSLHKTNVIGLPESIKFLPQLKVLKVCHCEMLQFIPVFPPSVECLSLESETPKQHAGTFIFLDCMNLDENSCNAILKDAIARTTCWMETILTTEWKNNERMKIIITQVPSSSNLCGFMFYLVLSEAQSCIIDELVINFVCECYLETSWGESIHVASSVVVEWGCDMTIGYQLNVMQDHVLLWYDEECSKQIMETVKGREANTEKKSHFNAKMTVKFVARLPNKEEAMVKECGIRWIYSNLEEGSSREQRSKRIIGS* 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0124 1341 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 389 576 - -
Amo04g0124 1341 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 706 794 - -
Amo04g0124 1341 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 388 - -
Amo04g0124 1341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 389 576 IPR044974 GO:0006952
Amo04g0124 1341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 388 IPR044974 GO:0006952
Amo04g0124 1341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 706 794 IPR044974 GO:0006952
Amo04g0124 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 411 IPR027417 -
Amo04g0124 1341 Gene3D Ribonuclease Inhibitor 680 812 IPR032675 -
Amo04g0124 1341 Pfam TIR domain 16 188 IPR000157 GO:0007165
Amo04g0124 1341 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 157 IPR035897 -
Amo04g0124 1341 Pfam Leucine Rich Repeat 553 572 IPR011713 -
Amo04g0124 1341 Pfam NB-ARC domain 205 370 IPR002182 GO:0043531
Amo04g0124 1341 Gene3D Ribonuclease Inhibitor 464 679 IPR032675 -
Amo04g0124 1341 SMART till_3 16 154 IPR000157 GO:0007165
Amo04g0124 1341 Gene3D - 196 343 IPR027417 -
Amo04g0124 1341 Gene3D - 14 189 IPR035897 -
Amo04g0124 1341 SUPERFAMILY L domain-like 477 1134 - -
Amo04g0124 1341 ProSiteProfiles TIR domain profile. 15 182 IPR000157 GO:0007165
Amo04g0124 1341 PRINTS Disease resistance protein signature 1101 1117 - -
Amo04g0124 1341 PRINTS Disease resistance protein signature 215 230 - -
Amo04g0124 1341 PRINTS Disease resistance protein signature 290 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0124 Amo-Chr4 2090335 2106991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0124 8 798 WRKY Transcription Factor Family AT4G12020 27.642 2.04e-60 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0124 - - ahf:112777818 1276.15