Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0067 ATGAAACTCAATTCAGAGATGGGTTCATCATCTCTGATCCCAACAGCACTCACCTCTACCCCATCACGTGACTCGCACGTGCACAACCACAACAAGAAGAAAAAGCCTCATTCCAAGAACCACAAACAGAAGAACAACCGCCAAGTCAACAAATGGAAATCCCAAACACAACAAAACCTCTACTCCACCAAACTCCGGCAAGCCCTCGCCGGATCCACCCTCTCGGGCAGCGGTAAGTCCATCCGCGAAACCGCCGACAGAGTTCTTGCCAGCGCCGCAAGAGGTAGAAGCCGGTGGAGCCGCGCCATACTCACGAACCGGCTCAAGCTGAGCTTCATGAAGAACAAGATAAAGAAGAAGAAGAAAAGAGTGGGACCGGTGGTCAGGTCGAGAAGAACAAGAACCCGGTTGAACGTGGTTCGATTGAAGGTAAAGACAGTTCCGGCGGTTCAGAAGAAAGTGAGGTTGTTGGGAAGGTTGGTTCCTGGTTGCAGGAAGGAACCTCTTCCGGTGATTCTAGAAGAAGCCATTGATTATATACCTGCTCTTGAGATGCAGGTTCGCGCCATGACTGCTCTCGCTAACTTGTTGTTAGCAAATTCTTCTTCTCCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCCTCCGGTCATGCTCCTCCCACCTGA 675 0.5007 MKLNSEMGSSSLIPTALTSTPSRDSHVHNHNKKKKPHSKNHKQKNNRQVNKWKSQTQQNLYSTKLRQALAGSTLSGSGKSIRETADRVLASAARGRSRWSRAILTNRLKLSFMKNKIKKKKKRVGPVVRSRRTRTRLNVVRLKVKTVPAVQKKVRLLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALANLLLANSSSPSSSSSPSSSSSSSSGHAPPT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0067 224 MobiDBLite consensus disorder prediction 1 24 - -
Amo04g0067 224 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 215 IPR044660 GO:0006355
Amo04g0067 224 MobiDBLite consensus disorder prediction 200 224 - -
Amo04g0067 224 MobiDBLite consensus disorder prediction 1 57 - -
Amo04g0067 224 CDD bHLH_AtIBH1_like 148 194 IPR044549 GO:0006355
Amo04g0067 224 MobiDBLite consensus disorder prediction 27 48 - -
Amo04g0067 224 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 21 215 - -
Amo04g0067 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0067 Amo-Chr4 1277606 1278833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0067 51 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 46.821 1.36e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0067 - - aip:107638969 302.367