Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0044 ATGCCTTCAGTTGTCATTATCATTTTTGCAACATGGGGTGTTGGTCCATTAGCATGTCAGATAAGGAAATTGCTTTTCCAAGTTACACTAGCATTGGAACCAGTAATTCTACCTACAGAAACTAGACAGGTAATTAAGGAACAGCTTCTGCATTTTGTAAGATCATTGTCAACTGTTTTGACCTTTGCCTATTGTTTATCAAGGTATGCCGATTCACTTGCTTTTGTCATGATCTATTAA 240 0.3667 MPSVVIIIFATWGVGPLACQIRKLLFQVTLALEPVILPTETRQVIKEQLLHFVRSLSTVLTFAYCLSRYADSLAFVMIY* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0044 79 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 27 IPR045042 -
Amo04g0044 79 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 30 68 IPR045042 -
Amo04g0044 79 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 27 - -
Amo04g0044 79 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 30 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0044 Amo-Chr4 784921 785442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0044 1 67 Mechanosensitive Ion Channel Family AT5G10490 37.113 2.15e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0044 K22047 - gmx:100796304 85.5001