Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0040 ATGCGCCTCCTTAACAAATTTTTAAATCAATTAACGCGCGAATATATAACTTCCTTTTTTCAAAGGATTTCGTTTCCTTTTTCGAATTTCTTGCCTTCTTTGTTTGATCTTGTTCGTGCGTTTCTCTTTACCTTTTCATTCGTTGTTTACGTGCGTTTTTCACTGGTTTCTCCTTCGTCATTTACGTGTGTTTCTCTCTCTGTTTTTTTGCTTCATTTTTCTCGATTTTCATGGTTTCTGAAATCAAGCTTTGAAATTGTTTTGAAGATAATAGATGATTCAAGTTCAGATTGTCAGCTGAACCAGGGTGAAGTGGATTTTGAATTTGAATCGAATGAAGTTCCTGAGCCCCTCTGTGTTGTTGATGACCAGTTTGTTCTCAAGGTTGGAATGACTTTTAACACCCTTGAAGATGCTACAAAATTTTACAAGGACTATGCGAAGGCTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAAGAAGGGAAACGAAATTAAAAATCAATTGATTACATGTAGCAGAGAGGGAAAATGTAAATCTAAAATATTTCTGACCGAGAAGACAAATCCCACAGCTGGTTTAAATTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCGAAGGTTGTGTTGCATCATTCATATCCTTATTATCCAACTCAAGCAGAGATGCTCAAACAGCTCAAGGAACTAAGCATATTCGTCCGTCGTACAATAGAGAATAACGAGAAAGCCGGTTCCAATTTATCTGGATCACCACTTCTAGGCTAG 795 0.3711 MRLLNKFLNQLTREYITSFFQRISFPFSNFLPSLFDLVRAFLFTFSFVVYVRFSLVSPSSFTCVSLSVFLLHFSRFSWFLKSSFEIVLKIIDDSSSDCQLNQGEVDFEFESNEVPEPLCVVDDQFVLKVGMTFNTLEDATKFYKDYAKAAGFSTRVRSTNKKGNEIKNQLITCSREGKCKSKIFLTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLHHSYPYYPTQAEMLKQLKELSIFVRRTIENNEKAGSNLSGSPLLG* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0040 264 Pfam FAR1 DNA-binding domain 141 223 IPR004330 -
Amo04g0040 264 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 113 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0040 Amo-Chr4 676330 678745 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g0040 FAR1 4.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0040 - - adu:110278638 273.092