Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0035 ATGGTTAACAGCACTACCGAGTGCAAGTTTCTTATTGTTAGGGAATTTGATAAAGAAAGGGATGTCAAGGTGGTGGAGAAGCTTGAAAGGAACTGTGAGATAGGGACCAAAAAAGGGGTCTCCATTTTCACTAACATGATGGGTGACCCTTTGTCTAGGATTAGGTTCTACCCCATCCGTGTTATATTGGTAGCTGAACTTCTTGAAAGCAAGGAGATTGTAGGGGTAGTTAGGGGATGCATTAAGAATGTTGGGACTACTACTCCTCCTGGTTCACTCTTGAAGATGGGTTGCATCATAGGCCTTAGAGTCTCTCCTACTTACAGGAGAAAAGGGGTTGCATTAAAACTTGTTACCTCACTTGAAGAATGGATGGTGAGAAATGGAGCGGAGTATTCATACCTAGCAACAGAGAAGAACAATGAAGCATCCAAAGCCCTATTTGCTCTTAAGTGCAACTATGTGAGTCTTAGCTCACTTGTCATTTTTGTTCATCCAACTAGCACTAGCACAAGCCTACCAACAAAGCATATTTCTGAAAGGGATATTAAAATAGAGAAGGTGAACATAGATCAAGCAATTTCCTTGTACAAAAGAATCTTGAAAACCAAAGAATTGTATCCATTGGACATAGACACTATCCTCAAGGAGAAACTAAGTCTTGGAACATGGGTATGTTATTACAAAGATGAGGGTTGCATCAAATTGCAAAACATGGTAGATAATAATAATGAAGATTTTATTACAACCAATAATAATCAAACCCTAATTGGATCAACATCATCATGGGTAATTTTTAGCATATGGAATACTTGTGAATCTTATAAGCTTCAAATCAAGAAGTCTTCTCATCATCATCCACTAAGGTTTCTTCACACAACACTGAAACATGCAAGAGAGAAGATTATTTTCCCATGTCTTAGAATTCTAGTGAGTGAATCACTGAGTAGACCCTTTGGATTTCTCTTCCTATATGGGCTCCATGGAGAAGGAAATAACCTTGGAAATCTCATGGAATTCATATGGAGGTTCACATCAAGGTTGGGAGAAAGCATGAAAGATTGTAGAGTGGTTATCACTGAGTTAGGGCTTGGTGATCCACTTGCAAATTATGTTCCTCAGACAGATTCTATGTCTTGCATTGATGATCTTTGGTACACAAAAAGACTCTCATCAATTGGACATAACAATGGAAAGGATGAAGAAATGGCTATGAAGAGATATGTAGGGAATGTTTTTGTTGATCCTAGAGAATTTTAG 1260 0.3825 MVNSTTECKFLIVREFDKERDVKVVEKLERNCEIGTKKGVSIFTNMMGDPLSRIRFYPIRVILVAELLESKEIVGVVRGCIKNVGTTTPPGSLLKMGCIIGLRVSPTYRRKGVALKLVTSLEEWMVRNGAEYSYLATEKNNEASKALFALKCNYVSLSSLVIFVHPTSTSTSLPTKHISERDIKIEKVNIDQAISLYKRILKTKELYPLDIDTILKEKLSLGTWVCYYKDEGCIKLQNMVDNNNEDFITTNNNQTLIGSTSSWVIFSIWNTCESYKLQIKKSSHHHPLRFLHTTLKHAREKIIFPCLRILVSESLSRPFGFLFLYGLHGEGNNLGNLMEFIWRFTSRLGESMKDCRVVITELGLGDPLANYVPQTDSMSCIDDLWYTKRLSSIGHNNGKDEEMAMKRYVGNVFVDPREF* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0035 419 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 154 IPR016181 -
Amo04g0035 419 Pfam Acetyltransferase (GNAT) family 64 152 IPR000182 GO:0016407
Amo04g0035 419 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 419 - -
Amo04g0035 419 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 9 419 - -
Amo04g0035 419 Gene3D - 20 165 - -
Amo04g0035 419 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 220 IPR000182 GO:0016407
Amo04g0035 419 CDD NAT_SF 62 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0035 Amo-Chr4 560088 562084 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo04g0035 Acetyltransf_1 1.9e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0035 - - adu:107483424 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3300 01 105364493 105366941 Amo04g0035 04 560088 562084 PCT
Amo04g0035 04 560088 562084 Amo01g3300 01 105364493 105366941 PCT