Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0034 ATGGCGTTCTGGTGGTCCTTGCTCGTTCTCGCACTCGCTTTCGCCATCGGCAAGTTCCTCCTCTGGCTCATTCCTCCTAAGGTTCCTTCCATCGATGTTGACGCTTCTGATGTTTTAGACGATGGAAACCAAGCTCAGGAGAACAGCTTCATATATGTACCTCCAAGGGGAGCGGCACAGCAATCTGGCACTAAAGTTCAGTGCTATGAGCCTGCTACCATGAAGTATTTGGGATATGTTCCTGCTTTGACCCCATATGAGGTCAGGGAGCAAGTGGAAAAAGTGCGGAAAGCCCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCCAATTCTTGCGTATACTTTTGAAGTATATAATAAAACATCAAGCGCTTATATGCGAAATATCTTCGCGTGATACTGGAAAGACAATGGTGGATGCCTCTTTGGGAGAAATAATGACAACATGTGAGAAGATCCATTGGCTACTGTCAGAGGGTGAGAAGTGGCTGAAACCTGAATACCGATCCAGTGGAAGATCAATGCTTCATAAGAGTGCTAGAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCCATTGTGTCATGGAACTATCCGTTCCACAATATTTTCAACCCTATGTTGGCAGCACTTTTTTCTGGAAATGGAATTGTGATTAAGATATCAGAAAACGCGAGTTGGTCTGGGTGCTTTTACTTCCGAATCATCCAGTCAGCACTTGCTGCCATAGGTGCTCCAGAGGACCTTGTTGAGGTGATAACAGGATTTGGTGAAACAGGAGAAGCATTGGTGTCTTCTGCTGATAAAGTCATTTTTGTTGGATCACCTGGTGTTGGCAAGATGATAATGAGAGGTGCTTCCGAGACACTTATACCTGTTACACTTGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGTTTTTATGTCCACAGGAGCATATATTCATCTTTTGTCAGTAAAGTTACACAAATTATAAAATCTGTTACAGCTGGTCCACCACTAGCTGGAAGGTATGACATGGGTGCTCTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTGTCAATGATGCTATAGATAAAGGTGCTGAAATTGTTGCAAGAGGAAGTTTCGGGCCTATTGGTGGAGATGCAGTTGATCAGTATTACCCCCCAACTGTGATTGTTAATGTGAATCACTCCATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTCAGCTCTGATGAAGAGGTTGTCAAGCTTGCAAATGACTCAAGATATGGGCTTGGCTGTGCTGTTTTCTCAGGGAATCAGAGCCATGCCAGAGAGATAGCTTCGCAGATACATTGTGGCTTTGCTGCTGTTAATGATTTTGCAGCAACATATATGTGTCAGTCCCTCCCATTTGGGGGTGTCAAACACAGTGGATTTGGACGATTTGGTGGTGCAGAAGGTTTGCGAGCATGCTGCCTTGTAAAAGCTGTTGTTGAAGATAGATGGTGGCCATACATAAAAACCGTGATACCTAAGCCTATTCAGGGTTGCGTACGCAGGTTAAGAATGAGTAGGGTTAGGGTTGAGGTATTTTCAACCCGCGAGTAA 1698 0.4429 MAFWWSLLVLALAFAIGKFLLWLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGAAQQSGTKVQCYEPATMKYLGYVPALTPYEVREQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKIHWLLSEGEKWLKPEYRSSGRSMLHKSARVEFHPLGVIGAIVSWNYPFHNIFNPMLAALFSGNGIVIKISENASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGETGEALVSSADKVIFVGSPGVGKMIMRGASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRSIYSSFVSKVTQIIKSVTAGPPLAGRYDMGALCMHEHSEKLEGLVNDAIDKGAEIVARGSFGPIGGDAVDQYYPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSRYGLGCAVFSGNQSHAREIASQIHCGFAAVNDFAATYMCQSLPFGGVKHSGFGRFGGAEGLRACCLVKAVVEDRWWPYIKTVIPKPIQGCVRRLRMSRVRVEVFSTRE* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0034 565 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 552 - -
Amo04g0034 565 SUPERFAMILY ALDH-like 57 533 IPR016161 GO:0016491
Amo04g0034 565 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Amo04g0034 565 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Amo04g0034 565 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Amo04g0034 565 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 552 - -
Amo04g0034 565 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Amo04g0034 565 CDD ALDH_F15-22 69 531 - -
Amo04g0034 565 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0034 Amo-Chr4 492250 499107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0034 1 545 Aldehyde Dehydrogenase Gene Family AT3G66658 79.083 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0034 - - gmx:100816920 1005.74