Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0031 ATGGAAAATTTGAGTCCTTTCAATGAGTTCGGTTTTAGTGCAATTGAGGATAAACATAGTTCATCAAATTATACTTCTTGGGCTATAGAGGGAATGAATGAAGTGAACAAGGTTCAATTTTCTGGTGCTGAAGAGTGGGGTGAGTCAATGGGAATTGACCCTTTTGGGTCTAGTTTTGAATTCTTTCCTTCACAGCAGCAGCAGCAACAACAATTATCATATCTTGAGTATGGAACATTGGAGAATCTACAATTTGTTGCGGTTTCTCCACCACCACAAACCCATACATACTTTGATGACCTCCACATGTTTGATGAAAATCCAACAAGAATGGTTCCACTAAGTGAAGAAACTATTGCAAACGACAAACAGCAAAACTCATCAACTCCTTTAGCATCACTTGAGTTATTGAAGAGCTATGGCAGCAACAAAGGATTTAAGAAGTTATGTGATGAAGAGAAAATTATGCAACCAATTGATCACTCTGCTGCAGGTAATGAAGTTCTTGGAAGAAAGCTTTCAACTGACGATGTGATGAGGATAGCAGGAACAAGGTTCATTCAATCATCACCATCATCACCAAAATCTTTAGGATCATCAGCTTTGAAGTCAATTTTTAGCCACCCTTTTGGTCAATTTTTCTCAGGACTCTCTGGTGAGGAGAAAGAGGAGGTTCAACTTGCTGAATCACTCTTGGCTTGTGCTGAGAAGGTGGGGTTTAAGCAGTACGGGCGAGCCGGCAAGTTGCTATCTCAATGCGAGTCATCGTCTTCCAAGACCGGTTCACCAGTTAAGCGAGTTGTTCATTACTTCGCGGAGGCTCTTCGCCTCAGGATTGATCTTGAGACGGGAAGAATTTCATCCAAGGACTTGAAAAAGATGCAACCAATGGATCCTCGAGAGATAACCAAGAATCTCACCCCCTCTGTTTTGGCATTTTATGGAGCAGCTCCTTTCTGTCAGATCACAATGTTCACACTAGTCCAATCTATAATTGAAAATGTTACTGAGGCAAAGAAGATTCACATCATTGATTTTGAAATCAGAAAGGGTGTGCAATGGACAACCCTGATGCAATCCCTTGTGTCAAGAAATCGATGTCCTTTAGAGCTGCTTAAGATAACAGCTGTTGGAAGTGGAAGCAATTCGAAGCTTATCATAGAGGACACTGGAAAGAGGTTGAAGGATTTTGCAATAAGCTTGAAGATAAACCTTTGCTATGATTATGTTATTGTACCTGACATGCTGCAACTCAGAGAGGATCTATTTAAGATAGATCCTGAGGAAACAATTGTGGTTTACTCTCAGTATGCACTTGGCAGCAAGATTCAGCAGCCGGACCAGCTCGAAACTATCATGAGAGTTGTCAAAACAATAAGGCCTAGTGTACTTGCGATAACTGAAATTGAGGCGAGCCACAATTCGACTTCATTTGTAAACCGGTTCATTGAGGCGCTTTTCTACTTCAGTGCATTCTTTGATTGTTTAGAGAATTGTATGAAGCATGACGAGCCGAACAGGCTGGTTTTCGAGTCGCAGTACCTTGCTTATGGAATCAAGAACATATTGGCTGCCGAGGGAGCAGAGAGGAATGCTAGGAATGTGAGGATTGATGTATGGAGGGCATTTTTCTCCCGGTTTGGACTGGTGGAAACAGAGATTAGCATGTTATCTTTGTTCCAAGCTGAGCTTGTTGCTAAAAGGTTCCCTTGTGGAAGCAGTTGTACATTTGATAGGGATGGGAATTCCCTTCTTTTGGGGTGGAAGGGAACACCATTGAACTCTATTTCTGTGTGGAAGTTCCTATGA 1809 0.4174 MENLSPFNEFGFSAIEDKHSSSNYTSWAIEGMNEVNKVQFSGAEEWGESMGIDPFGSSFEFFPSQQQQQQQLSYLEYGTLENLQFVAVSPPPQTHTYFDDLHMFDENPTRMVPLSEETIANDKQQNSSTPLASLELLKSYGSNKGFKKLCDEEKIMQPIDHSAAGNEVLGRKLSTDDVMRIAGTRFIQSSPSSPKSLGSSALKSIFSHPFGQFFSGLSGEEKEEVQLAESLLACAEKVGFKQYGRAGKLLSQCESSSSKTGSPVKRVVHYFAEALRLRIDLETGRISSKDLKKMQPMDPREITKNLTPSVLAFYGAAPFCQITMFTLVQSIIENVTEAKKIHIIDFEIRKGVQWTTLMQSLVSRNRCPLELLKITAVGSGSNSKLIIEDTGKRLKDFAISLKINLCYDYVIVPDMLQLREDLFKIDPEETIVVYSQYALGSKIQQPDQLETIMRVVKTIRPSVLAITEIEASHNSTSFVNRFIEALFYFSAFFDCLENCMKHDEPNRLVFESQYLAYGIKNILAAEGAERNARNVRIDVWRAFFSRFGLVETEISMLSLFQAELVAKRFPCGSSCTFDRDGNSLLLGWKGTPLNSISVWKFL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0031 602 ProSiteProfiles GRAS family profile. 218 600 IPR005202 -
Amo04g0031 602 Pfam GRAS domain family 228 600 IPR005202 -
Amo04g0031 602 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 56 600 - -
Amo04g0031 602 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 56 600 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0031 Amo-Chr4 475708 477890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0031 221 601 GRAS Transcription Factor Family AT5G17490 30.469 4.10e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo04g0031 GRAS 2.5e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0031 - - adu:107483434 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1328 14 21598291 21600212 Amo04g0031 04 475708 477890 hybridization