Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g3021 ATGGACTCGAAAACTAGTGCTAGAGCTCTCCCAAAACATCATCACAACACAACGAAGACGGGCAAACTGGAGCCGACTGCTTCCGAAGGTTCTTTGAAGTCTACACAGAACACAACGAAGAAGGATACTGGGGAGATTCCGGGAAGCAAGAACTTGGGAGCTTCGGTCCAGAAGGTGTCTGCTGATTCCTTGAGTCATAAACTTGCTGCTGCCACTATTGGCACTTCCTCGACTGTTCTTGCAAAAGCATCTAGAGAAGCGGATCACGGCATTAATGAGAGCTTAGGCTCACTGGAGAACTCTGCTGATCAAGAGAAAAAGATATCAGAATATGGAAGTGTGAAGAGCAGTTCTGTATCTGCGAAAGTTAGTGATGGGGCTAGCAGTCTCGCAAAGACAAGTGGGAGTGCTAAGATCAGTGATCGAGTCGACTTTGTTGAGAGCGGTAAGAGCAGTATCTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGCAGCACCGTAAACAAGCCCCATAAGGCCAATGACTTGAGATGGGAAGCTATCCAAGCTGTTCGATCTAGAGATGGGGCGTTGGGTTTAGGTCACTTTAGACTGCTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTATATCTCTCTGAGTTGAGTGGAACTAAATGTTATTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCGAGTCGGAAAAAACTACTTCGTGCTCAGACAGAACGAGAAATCCTGCAATCGCTGGACCATCCCTTTCTTCCAACTTTGTATACCCATTTTGAGACGGAGAAGTTCTCATGCTTGGTAATGGAATTCTGCCCCGGCGGAGACCTCCATACACTGAGGCAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAGTTTTATGTGGCGGAGGTCCTACTGGCTTTGGAGTACCTTCACATGCTTGGGATCGTCTACCGTGACCTTAAACCGGAAAACGTCTTGGTTAGGGATGATGGTCATATTATGCTCTCTGACTTCGACCTTTCACTCCGCTGTGCTGTTAGCCCAACTCTTGTTAAAAGTGCGTCCATGGATGCCGAGCCTCTAAGAAAGAATCCTGTTTATTGTGTCCAGCCAGCATGTATTGAGCCGACTTCCTGTATCCAGCCATCCTGTGTCGCTCCTACTACATGCTTTTCACCTCGGCTCTTTTCTAGTAAATCAAAGAAGGACCGGAAACCCAAAAATGAAATTGGCAACCAAGTGAGTCCCTTGCCGGAGCTCATTGCAGAGCCTACTGATGCTCGCTCTATGTCATTTGTCGGAACCCATGAATACTTGGCACCTGAGATCATTAAAGGCGAAGGTCACGGAAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATATGAGCTCTTGTTTGGTAAAACTCCTTTTAAGGGATCCGGGAACCGAGCTACATTGTTTAATGTTGTAGGTCAGCCTCTGCGGTTTCCTGAAGCACCTGTTGTCAGTTTCGCGGCGAGGGATCTCATAAGAGGGTTGCTCGTAAAAGAACCTCAGCACAGATTGGCATATAAACGAGGTGCTACCGAGATCAAGCAGCATCCCTTTTTCGAAGGTGTGAACTGGGCATTGATCCGCTGTGCTACCCCACCCGAGATCCCCAAGCCTGTAGAGTTCGAGAAGATACCTTCCCCAGCCTCGTCTGCCGGCGAAAAGGCCGTCAATCACATGTCAATAGCGAATCAGAAGGGTTCGGATAATTATCTGGAGTTTGATTTCTTCTAG 1800 0.4756 MDSKTSARALPKHHHNTTKTGKLEPTASEGSLKSTQNTTKKDTGEIPGSKNLGASVQKVSADSLSHKLAAATIGTSSTVLAKASREADHGINESLGSLENSADQEKKISEYGSVKSSSVSAKVSDGASSLAKTSGSAKISDRVDFVESGKSSICRGSTSSDVSDESTCSSFSSTVNKPHKANDLRWEAIQAVRSRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSASMDAEPLRKNPVYCVQPACIEPTSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEFEKIPSPASSAGEKAVNHMSIANQKGSDNYLEFDFF* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g3021 599 PANTHER FLIPPASE KINASE 1-RELATED 13 599 - -
Amo03g3021 599 SMART serkin_6 204 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g3021 599 MobiDBLite consensus disorder prediction 21 45 - -
Amo03g3021 599 CDD STKc_phototropin_like 203 566 - -
Amo03g3021 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Amo03g3021 599 Gene3D Transferase(Phosphotransferase) domain 1 288 356 - -
Amo03g3021 599 SUPERFAMILY Protein kinase-like (PK-like) 181 566 IPR011009 -
Amo03g3021 599 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 13 599 - -
Amo03g3021 599 Gene3D Phosphorylase Kinase; domain 1 202 287 - -
Amo03g3021 599 Pfam Protein kinase domain 205 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g3021 599 Pfam Protein kinase domain 439 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g3021 599 MobiDBLite consensus disorder prediction 1 54 - -
Amo03g3021 599 ProSiteProfiles Protein kinase domain profile. 204 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g3021 599 Gene3D Transferase(Phosphotransferase) domain 1 436 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g3021 Amo-Chr3 122949047 122953524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g3021 46 599 AGC Kinase Gene Family AT5G47750 80.396 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo03g3021 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g3021 K08286 - gmx:100798088 993.801