Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g3020 ATGTCTTCTGCAACATTATTAACCGAGTCCTTGCATAGTATGCACCAATCATCATCATCATCATCAGATGAAGGTGCTAAATCCACCATGGGAAGTTCCCAAATGTTCAACAACTACTATGGAATCATCACTAGTAGTAGTAGTGAGATAGTAGAGATAGAAGAAGAAGAAGAAGAAGAAGAACAAGACATGAAGACATCAAAATTGTACCTTAATAATGATGCTCCTAGGACTATGTCAAGAATTAGTGAAGGGAAGAGTAGTGAGGAAGAAGAAAGTGTTTATGTAGCAGTTGGTAAGAGTGAGACAAGCATGGAAGCTCTAACATGGACTCTCAAGAACTTGGCTACTACCTCATCTACCATAATTTATCTCATCCATGTTTTTCCTGAGATCAAACACATTCCAAATCCATTGGGAATGGGAATGATCCCAAAGAGCCAAGTGAGTGGTGAGCAAGTAGAGACCTACATGGCCCAAGAAAGAGCCAAGAGAAGAAACCTCCTTCACAAGTTCCTTCAAACTTGTTCTGCTTGCAAGGTTAAGGTGGACACCATTCTCATTGAGAGTGATTTTGTTGCAAAGGCTATATTGGACTTGATCCCCATTCTTCATATTACAAAACTAGTTCTTGGACTCAACAAATCCCAATTAAGAAAACTAAGATCAAGAAAAGGGAATGGCATAGCAGATCAAGTACTTCAGAGTGCACCAGAAATGTGCAAGGTGAGAATTGTGTGTGAAGGGAAGGAAATTAGTGAAAACATAACTGGATCAGGGTTAGGTTCAGGGTCACCCTCTCCTTCTCCTCATGCCACTTCCATGCCCCATAAAGAGCCTCTCAAAAAAGATTCTGTTTCATGCACTTGTTTTAACTTTTAA 882 0.3991 MSSATLLTESLHSMHQSSSSSSDEGAKSTMGSSQMFNNYYGIITSSSSEIVEIEEEEEEEEQDMKTSKLYLNNDAPRTMSRISEGKSSEEEESVYVAVGKSETSMEALTWTLKNLATTSSTIIYLIHVFPEIKHIPNPLGMGMIPKSQVSGEQVETYMAQERAKRRNLLHKFLQTCSACKVKVDTILIESDFVAKAILDLIPILHITKLVLGLNKSQLRKLRSRKGNGIADQVLQSAPEMCKVRIVCEGKEISENITGSGLGSGSPSPSPHATSMPHKEPLKKDSVSCTCFNF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g3020 293 Coils Coil 43 63 - -
Amo03g3020 293 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 43 292 - -
Amo03g3020 293 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 43 292 - -
Amo03g3020 293 MobiDBLite consensus disorder prediction 256 272 - -
Amo03g3020 293 MobiDBLite consensus disorder prediction 1 32 - -
Amo03g3020 293 CDD STK_N 94 249 - -
Amo03g3020 293 Gene3D HUPs 86 255 IPR014729 -
Amo03g3020 293 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 94 241 - -
Amo03g3020 293 MobiDBLite consensus disorder prediction 256 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g3020 Amo-Chr3 122943241 122945696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g3020 84 253 U-box Gene Family AT5G65500 31.073 2.50e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g3020 - - lang:109333758 277.33