Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g3008 ATGAAGTATCTTGGCGACCTGTCTGAAGTATATGAACAAGTTTTGAAAGAACAACTCGAAATTAGCAGAGGGAAAGGGACAGGGGAATTGTTACAATGGGAGGATGCTCAGAAAATGAAATACTCATGGAATGTTGCATCTGAGGTCATGAGGCTATCCCCTCCAGTGAATACTAATTTCAAAGAAGCAATAAGGGATTTTAACTATGCTGGCTATACCATTCCTAAAGGGTGGAAGCTGCGTTGGGCCACGTGTTCAACACACATGGATCCAGAATACTTCCCGAATCCGGAAGCTTTTGATGCATCAAGGTTTGAAGGGGAAGGTCCTACAGCCTATTCATATGTTCCATTTGGGGGAGGGCCTAGAATGTGTCTGGGAATAGAGCTTGCAAGGTTGGAGATACTTGTGTTCATGCATCACATTGTGAAACGGTTCAAGTGGGATTTGGTGAATCCTGATGAGAAGTTTAAGCATGATCCCTTGCTTGAGCCAGTAAAAGGACTTCCGGTTCGGCTACACCCTCACCATGTCTAG 537 0.4451 MKYLGDLSEVYEQVLKEQLEISRGKGTGELLQWEDAQKMKYSWNVASEVMRLSPPVNTNFKEAIRDFNYAGYTIPKGWKLRWATCSTHMDPEYFPNPEAFDASRFEGEGPTAYSYVPFGGGPRMCLGIELARLEILVFMHHIVKRFKWDLVNPDEKFKHDPLLEPVKGLPVRLHPHHV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g3008 178 PRINTS B-class P450 signature 61 88 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS B-class P450 signature 44 55 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS B-class P450 signature 89 104 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS B-class P450 signature 116 125 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS B-class P450 signature 125 136 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS P450 superfamily signature 125 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS P450 superfamily signature 116 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 PRINTS P450 superfamily signature 44 55 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 Pfam Cytochrome P450 9 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 118 127 IPR017972 GO:0005506|GO:0016705
Amo03g3008 178 PANTHER CYTOCHROME P450 26 1 174 - -
Amo03g3008 178 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 1 174 - -
Amo03g3008 178 SUPERFAMILY Cytochrome P450 3 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3008 178 Gene3D Cytochrome P450 1 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g3008 Amo-Chr3 122665561 122666346 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g3008 1 178 Cytochrome P450 AT3G19270 37.912 7.54e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g3008 K20667 - adu:107480504 313.923