Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g3006 ATGGAGGTGGCCAAGCTTCTAGGCTTGCCAGCACTTTTGTTTCTCTTGGTCCTTTGTTTTCATCTGATAAGAAAATTTGCGAAACTGGGAAAGAAGCCAAATCTTCATCTTCCCCCTGGAAGCTTAGGATGGCCGATAGTCGGAGAAACCTTTGAGTTTATGCGCGAATCTAAGAAGGGAAACATGTCAAGGTTCACACTAGAGAGAATGGAGAAATATGACTCCAGAGTGTTCAAGACTTCATTTCTTGGAGATCCAATGGCTGTGTTTTGCGGCATGGCCGGGAACAAGTTCTTGTTCAGCAATGAGAACAAACAAGTCCAATTATGGTGGCCCTCTTCAATAAGGAAGCTGTTAAGGACATCTCTGGTTACTAAGATTGGTGAAGATGCAAAGTTGACTAGAAAGTTGCTATTGAGCTTTCTTAGTGCAGAAGCACTCAGGAATTTCGTGCCCAAAATGGATAGCATTGCTCGGAGCCATTTAAACACACATTGGAAAGGAAAGGAGCAGGTGATTGTGTATTCCACAACACAGCTATACACATATTCATTGGCTTGTTGCCTATTTTTGAGCATTGAAGACCCTGCCCATGTATCAAAGTTTTCATCCAAGTTTGAAGGGCTTGTGAAAGGCATGCTTGGCTTCCCCGTCAACTTGCCCGGAACAAAATTCCATCAAGCCATGAAAGCCGCAGATGAAATAAGGAAAGAGATTAAAATGCTTGTAAGGCAAAGGAAAGTGGATTTGGAAGAGAAGGCGTCTCCATCACCTAGCCAAGACCTTTTGTCACATTTGCTTGTCACACCTGATGCCAGTGGAAGATTCATGCCCCAAGAGGAGATCATTGACATCATGCTACAGCTGCTTTTTGCTGGCCACGACACTTCTCGGTCGGCCTTATCGTCTATCATGAAGTATCTTGGCGAAATGCCTCAAGTTTATGAACAGGTTTTGGAAGGTAAGTTTTGCAGCATAATCCTTGAACATACAGAACAACTCGACATAAGCCGAGGGAAAGGGACAGGGGAGTTGTTGCAATGGGATGATGTTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCATGAGGCTATCACCACCTGTTGCTGGTGCTTACAGAGAAGCAACAGGGGATTTTACCTTTGCTGGCTATACCATTCCTAAGGGATGGAAGTTGAACTGGACCACTTTCTCGACACACATGGATCCGGCACACTTTCCGAATCCCAAAGTTTTTGATGCATCGAGGTTTGAAGGGGAAGGTCCTGCACCCTATTCATATGTTCCATTTGGAGGAGGGCCTAGAATGTGTTTGGGACTAGAGTTTGCAAGGCTAGAGATACTTGTGTTCATGCATCACATTGTGAAACAATTCAAGTGGGATTTGGTGAATCCAAATGAGAAGTTTAAGTATGATCCCTTGCTTGAGCCAGAAAATGGACTTCCAATTCGGCTTCACCCTCGCCCTGTCTAA 1482 0.442 MEVAKLLGLPALLFLLVLCFHLIRKFAKLGKKPNLHLPPGSLGWPIVGETFEFMRESKKGNMSRFTLERMEKYDSRVFKTSFLGDPMAVFCGMAGNKFLFSNENKQVQLWWPSSIRKLLRTSLVTKIGEDAKLTRKLLLSFLSAEALRNFVPKMDSIARSHLNTHWKGKEQVIVYSTTQLYTYSLACCLFLSIEDPAHVSKFSSKFEGLVKGMLGFPVNLPGTKFHQAMKAADEIRKEIKMLVRQRKVDLEEKASPSPSQDLLSHLLVTPDASGRFMPQEEIIDIMLQLLFAGHDTSRSALSSIMKYLGEMPQVYEQVLEGKFCSIILEHTEQLDISRGKGTGELLQWDDVQKMKYSWNVASEVMRLSPPVAGAYREATGDFTFAGYTIPKGWKLNWTTFSTHMDPAHFPNPKVFDASRFEGEGPAPYSYVPFGGGPRMCLGLEFARLEILVFMHHIVKQFKWDLVNPNEKFKYDPLLEPENGLPIRLHPRPV* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g3006 493 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 Gene3D Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 Pfam Cytochrome P450 38 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 17 481 - -
Amo03g3006 493 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3006 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Amo03g3006 493 PANTHER CYTOCHROME P450 26 17 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g3006 Amo-Chr3 122662527 122664206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g3006 36 395 Cytochrome P450 AT5G36110 41.873 1.03e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g3006 - K20667 adu:107480504 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3919 13 131140421 131144358 Amo03g3006 03 122662527 122664206 hybridization