Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g3004 ATGGAGTTGGCCAAGCTTCTAGCCATGCCAGCACTTTTAGCACTCCTCCTCCTCTATCTTCATTTCATGAGAAGGAAGATTCGGAATGGGCCTCCAGGAAGCTCAGGATGGCCAATTGTTGGAGAAACCTTCAAGTTTATCAGCGCGGCTCGTGAGGGAACCCTGGTGAGGTTCATACAAGAGAGAATGGAGAGGTATGATTCAAGGGTGTTCAAGACTTCGTTTCTTGGAGATCCTATGGCAGTGTTTTGCGGCACGGCGGGGAACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTGCAAGTATGGTGGCCAAGCTCTATAAAGAAGCTGTTAAGGTCTTCTTTGGTTAATAAGGTCGGCGATGAAGCAAAGATGACAAGAAGGTTGCTCTTGACCTTTCTCAATCCTGAAATTCTCAGAAATTTCGTGCCTAAAATGGATACCATTGCTCAAATCCACATTAACACTCATTGGCAAGGAAAGGAACAGGTGGTTGTTCATTCTACTGTGCAGAAATACACTTATGCTTTGGCCTGTTCCTTGTTTCTGAGCATTGAAGATCCTCTCCACGATTCAAAGTTTTCGTCGAGATTTCACCGATTCTTAAAAGGCTTGGTTGGCTTCACCATCAACTTGCCCGGAACAAGATTTCACCAAGCAATGAAAGCTGCCAACGAAATAAGGGAAGAAATAAAAAAGATCATAAAGCAAAGAAAAGTGGATTTGGAAGAGAAAAGAGCGTCACCAAGCCAAGACATTCTCTCACATTTGCTTGCAACACCCGACTCCAATGGAAGGTTCCTAACTGAAATCGAGATCATGGATAACATACTCCTCCTCCTTTTCGCCGGCCACGATACTTCTAGATCCACTCTGTCATCTCTCATGAGGTACCTGGCGCAGCTTCCTCATGTTTATAACAAGGTTTTGGCAGAACAAGTTGAAATTAGCAGAGCAAAAGGGGAAGGGGAATCCCTGCAATGGGAGGATGTTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCTTGAGACTATCTCCACCGGTCACCGGTGCTTACAGAGAAGCCTTAAAGGATTTTAGCTATGCTGACTATACCATTGGAAAGGGCTGGAAGTTGCATTGGACAACCTGCTCTTCACACGTGGATCCCAGGCTCTTCACGAATCCCGAGGCTTTTGACGCGTCGAGGTTTGAAGGGGCAGGCCCTGCGCCGTATTCGTATGTTCCGTTTGGTGGAGGGCCTAGAATGTGTTTGGGGCTAGAGTTTGCAAGGCTAGAGATACTTGTGTTCATGCATCATATTGTGAAACAGTTCAAATGGGATTTGGTTAATCCTAATGAGAAGTTCAAGTATGATCCCATGCTTGAACCTGTAAATGGACTTCCGGTTCTGCTTCATCCTCACCATTGA 1422 0.4508 MELAKLLAMPALLALLLLYLHFMRRKIRNGPPGSSGWPIVGETFKFISAAREGTLVRFIQERMERYDSRVFKTSFLGDPMAVFCGTAGNKFLFSNENKNVQVWWPSSIKKLLRSSLVNKVGDEAKMTRRLLLTFLNPEILRNFVPKMDTIAQIHINTHWQGKEQVVVHSTVQKYTYALACSLFLSIEDPLHDSKFSSRFHRFLKGLVGFTINLPGTRFHQAMKAANEIREEIKKIIKQRKVDLEEKRASPSQDILSHLLATPDSNGRFLTEIEIMDNILLLLFAGHDTSRSTLSSLMRYLAQLPHVYNKVLAEQVEISRAKGEGESLQWEDVQKMKYSWNVASEVLRLSPPVTGAYREALKDFSYADYTIGKGWKLHWTTCSSHVDPRLFTNPEAFDASRFEGAGPAPYSYVPFGGGPRMCLGLEFARLEILVFMHHIVKQFKWDLVNPNEKFKYDPMLEPVNGLPVLLHPHH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g3004 473 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 12 462 - -
Amo03g3004 473 SUPERFAMILY Cytochrome P450 22 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 Gene3D Cytochrome P450 23 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Amo03g3004 473 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 Pfam Cytochrome P450 31 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g3004 473 PANTHER CYTOCHROME P450 26 12 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g3004 Amo-Chr3 122631945 122634635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g3004 29 393 Cytochrome P450 AT5G36110 43.478 7.26e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g3004 - K20667 adu:107480504 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3917 13 131106118 131108448 Amo03g3004 03 122631945 122634635 hybridization