Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2985 ATGCTCACTATGACGCAACAGAATGTGGTTGTGCCCGCCGAGGAGACTAAAAGGGCGCAAAAGCCACCGGCTATACCGGGAGCCTACATTCCCATTCCCAGGAGGACTGTCTTGAAGACCCTTGAAATCAATGCTTGGCTTGACTCCATGAGAGCTTCTTCTCCCACTCATCTCAAATCCACTCCTTCTCTCGCTCAAGACCACTCCTCTTCTTGGATTCTTAACCACCCATCGGCACTAGACATGTTTCAACAAATCATACATGCATCAAAGGGAAAGCAAATAGTCATGTTTCTCGACTATGATGGCACCTTGTCACCCATAGTCGATGACCCCGATCGTGCTTTCATGTCCGATTCAATGAGAAAGACTGTGAGGAAGCTTGCAACGTGTTTTCCTACTGCTATAGTTACGGGCAGATGCAGAGACAAGGTATATAACTTTGTTCGGTTGGCGGAACTATATTATGCTGGAAGCCATGGCATGGATATAAAAGGCCCAACAAAAACCTCCAAATATAACAAAGACACCAAGTCAGAGGCAGTTCTTTTTCAACCTGCCGCTGAATTTCTTCCTCTCATAGATGAGGTGTACCAACAGTTGGTTGAGAAAACGAAATCAACTCCTGGTGCCCGGGTGGAGAACAACAAATTTTGTGTCTCTGTTCATTTTCGTTGTGTTGACGAGAAGAAATGGAGTGAACTGGCGCAACAAGTGAGATCAGTGTTAAACAAGTACCGGAAGCTTCGTCTTAGCCAAGGGAGGAAGGTATTGGAGATTCGTCCTACTATTAAATGGGACAAAGGGAAGGCCCTCGATTTTTTGTTAGAGTCTCTTGGATTTGCCGACTGTAGTGATGTATTTCCTGTTTATATTGGAGATGATAGAACCGATGAAGATGCATTCAAGAAATTGAGAGACAGAGGACAAGGTCTTGGAATTCTTGTCTCGAAATTTCCGAAAGACACTAATGCAGCATACTCTTTACAAGAACCTAATGAGGTTATGGACTTTCTTCAACGTTTGGTGGAGTGGAAGAAAGAATCCCTGCAAGCATCTTCTAGGGTGTAA 1071 0.4444 MLTMTQQNVVVPAEETKRAQKPPAIPGAYIPIPRRTVLKTLEINAWLDSMRASSPTHLKSTPSLAQDHSSSWILNHPSALDMFQQIIHASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLATCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKTSKYNKDTKSEAVLFQPAAEFLPLIDEVYQQLVEKTKSTPGARVENNKFCVSVHFRCVDEKKWSELAQQVRSVLNKYRKLRLSQGRKVLEIRPTIKWDKGKALDFLLESLGFADCSDVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPKDTNAAYSLQEPNEVMDFLQRLVEWKKESLQASSRV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2985 356 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 355 - -
Amo03g2985 356 TIGRFAM T6PP: trehalose-phosphatase 93 343 IPR003337 GO:0003824|GO:0005992
Amo03g2985 356 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 97 308 IPR006379 -
Amo03g2985 356 Gene3D - 198 355 IPR023214 -
Amo03g2985 356 Gene3D - 95 190 IPR023214 -
Amo03g2985 356 CDD HAD_TPP 96 336 - -
Amo03g2985 356 Pfam Trehalose-phosphatase 98 332 IPR003337 GO:0003824|GO:0005992
Amo03g2985 356 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 355 IPR044651 GO:0004805|GO:0005992
Amo03g2985 356 SUPERFAMILY HAD-like 96 345 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2985 Amo-Chr3 122332252 122334579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2985 80 342 Trehalose Biosynthesis Gene Families AT1G60140 25.623 5.98e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2985 K01087 - gmx:100794430 583.948