Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2980 ATGTTGCAGAGCATGACAGTGCATAATATAAGGAATACTCAGGATCTGCTAGAACTGGCGATGGATCTGTTAGACGAGATCAAGTTGGTGGGGTCAAAATACTCAGGTTTAGTTCAATATTTAATCTGTATTGGTTTCTGTGTTGTTGGCTTATGTATTTTGCAGCTTGTTCATCAGGGTTCACTGAATTATATTAGTTYCCAGTTACAACCAAAAATAACTTCAAGAGATCCTGTTTCTCAAAGCAATAGGTCTTCAAGAGGGATCGAGATGGGGGGAGGGGCGGCGGGGGGTACCCGATTTCTTCTACAAGGAAGCTCAGCGCCTTGGCTATGTTGCTCGCTCTGCCTTCAAGCTCATCAATGCTGGCTCATCCGTACTGGACCTCGGCTGTGCTCCGGGTGCTTGGCTCTCCACAGGTACCCTCTCTTACTTGAAACTTACCAAATAAAAGAAAATGGACTGACTTTGTTGTGGCAAAATGCTGAACAAACATTTTATGGAATTAGGCAAAAAGGGTTTTCTGTTATACTTCCGGACATGTGCCCTTTGGTTTCTGGAATCACAACTAAAGATGCAGCTCTGTCAGTGGAGCTAGGGATGCGAGCATTGGATTTGGCTATTGGCAGAAGAGCTGCATTTTCATTTTATGCTGACGGTGGTGATAATCAGGAAGGTGAACAAAGCCATGATGATCCATCCACTTTGGCGGAAACTGGAGTGTTGCGAGTTGGTGGGAACCTTCTTATAAAGCTTTTGGAGAGCGAAGATGCAAAAGGTGGTGTGAACAATCTTCATGAACTCTGGGCCCTTCTCAATTTTCTTCTGCCTAAAATTTTTAGCTCTGCTGAAACTTTTGATGAATGGTTCCAAATATCAGGTAAGAAGTTTTGGAATTTGTTTCATTTGCAACCTATGCGAGATAAGAAGGGAGAAGTGCAGTATTTTATTGGTGTTCAACTTGATGGTAGCCAACAATTGGAGCCTCTTCACAACTGCATTGCAGATGATACTGCCAAAGAGGGACAATTATTGGTAAAACAAACTGCTGAAAATGTTGATGATGTTGTTAGAGAACTTCCAGATGCTAATATGGCATATGGAGATTCATCTTTCCGGGATTACAAGCTAGCCTCTGAGGAAGCAATGGCTACAATAGTTAAAAAGTTGCAGGCCCACAGAGCTGTTAGGATGGTTTTCCTCACCAATTTCAGGGAAGTTGAAAGGCTTTCCAAAATCCTTTTTATATATACAAAAAAGAATCCACTTTTTAGGGACAGCTTTCTGATGAATGGTTATGTTCTAAATACTGGCCGTGCAGTTCAAGGAATGCCTCTAAACAGCTGGATTTGTGAGTTTTAG 1362 0.4207 MLQSMTVHNIRNTQDLLELAMDLLDEIKLVGSKYSGLVQYLICIGFCVVGLCILQLVHQGSLNYISXQLQPKITSRDPVSQSNRSSRGIEMGGGAAGGTRFLLQGSSAPWLCCSLCLQAHQCWLIRTGPRLCSGCLALHRYPLLLETYQIKENGLTLLWQNAEQTFYGIRQKGFSVILPDMCPLVSGITTKDAALSVELGMRALDLAIGRRAAFSFYADGGDNQEGEQSHDDPSTLAETGVLRVGGNLLIKLLESEDAKGGVNNLHELWALLNFLLPKIFSSAETFDEWFQISGKKFWNLFHLQPMRDKKGEVQYFIGVQLDGSQQLEPLHNCIADDTAKEGQLLVKQTAENVDDVVRELPDANMAYGDSSFRDYKLASEEAMATIVKKLQAHRAVRMVFLTNFREVERLSKILFIYTKKNPLFRDSFLMNGYVLNTGRAVQGMPLNSWICEF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2980 453 Gene3D Vaccinia Virus protein VP39 139 293 IPR029063 -
Amo03g2980 453 PANTHER PHOTOTROPIN-1 293 366 - -
Amo03g2980 453 Pfam FtsJ-like methyltransferase 170 279 IPR002877 GO:0008168|GO:0032259
Amo03g2980 453 PANTHER FLIPPASE KINASE 1-RELATED 293 366 - -
Amo03g2980 453 Gene3D PAS domain 294 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2980 Amo-Chr3 121914817 121919144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2980 290 369 AGC Kinase Gene Family AT3G45780 67.500 3.35e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2980 K20715 - adu:107496884 238.039