Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2945 ATGGCTGGTGCACTTGTTGGTGGAGCTTTTCTTTCTGGCTTCATTAACGTTGTCTTTGACCGGTTCCTTACAACTGATGCTGTCAACTTGGTCTTGGGCAAGAAACTTGGCCCTGACTTGGTTCAAAGGCTGAAGACTGCTCTGTTGGGTGCTGAAGCTCTTGTTGCCGACGCTGAGTTGAAGCAGTTCGGTAATCCATCTGTGAGGAAGTGGCTCGATAGTCTCCGGGATGCTGTTTACTGTGCTGAGGACTTGCTCGACACTGTCCTCACCAAATCCCCCACTCAAAAGGAGGTACGTCCTTTCCTCAACACCATTAACTTTTTCATCAACCGAGATAGGGAGATGGTAGATAATATGGAAAGGGTGGTTAGAAGAATAGAGGATCTTGGAAAACAAAAAGATAACCTTGGTCTTGAAAAGATTCCCACTGGTAGCTCATCATGGAGGATTCCGTCCAGTTCTCTTGTAAGAGGGAAGGTATATGGAAGGGAGGATGACAAGAAGGCCTTAATCAAGATGCTGAATGACAACAGTGAGCATAACTTATCTGTGATCGCTATTGTTGGCATAGGTGGGGTTGGTAAAACAACATTAGCCCAATCAGTATACAACAATGAGGAGGAATTCATGAAGGGATTTGATCTAAAAGCATGGGTTTGTATTTCAGAAAATTTTGATATTGCTGAGACTACAAAGAATGTTTTAAAGGAGATTTCTCCGCATACTCAGTGTCTTGACCATTTCAATTCACTTCACCATGCTTTGAAAGAAAAATTGTTGAATAAGAAGTTCTTTATTGTTCTGGATGATGTTTGGAGTGATGATGGTGACAGATGGATCAATTTTTTGACCCCTTTCCAATATGGGAAGAAAGGAAGTATTGTTCTTCTGACTACTCGTGGGAAAAATGTTGCTTTAGCAGTTCAGAATTGTCACCCTTATTTTCTCAGAGGGTTGTCGGAAGACTATTGTTGGTCAGTGTTTGCAGACAATGCATCATTTCCACAATCTAATGGAAATGCAGCACTTGAAGGAATTGGTAGAGAGATTGTCAAGATGTGTGGTGGCATGCCATTAGCTGCAGAAACACTTGGACGATTGTTACGTACAAAGCATGATGTTGAGGAATGGAACAAGATACTAATGAGTGATATTTGGGAATTTTCTGTGGAGAAGAGTAAGATTATTCCAGCATTGCTGATAAGTTACTTCCATCTTCCTCCACATTTAAAGCGTTGTTTTGTTTATTGTGCTTTATATCCCAAGGATTATAAATTTAAAAAGGACGAACTAATCCTTTTGTGGATGGCAGAAGATCTTTTACCACCACCAAAGAGAGGAGAGAGTTTAGAAGAAGTTGGTTGTGAGTGTTTTGATGAACTAACTTCCAGATTATTTTTCACAAAGCTTCAAATTGCTCATGATTATTTTGTGATGCACGATCTCTTGCATGATTTAGCAATATTCCTTGCTGGGGATTTCTATTGCAACTCAGAAGAACTTGGTAAAGAGGAGGAGATAAGGATGCAGACTCGGCATTTATGTGTAAATTTAAATCACCGTAGCTCGAAACTTCTTAATTTGATTTCTAAAGTAGAATCTTTGAGGACATTATTATTGTTTGGCGATCTCTCATCTCCTAACTGCAACATTGAAGAGGCAACATGTGACATATTACCGAAGTGTAAATACTTGAGAGTTTTATCCTTTGATAAACTTGATGTGTTGCCTAATTCAATAGGAGAATTGATTCATTTGCGCTACTTGGATCTCTCTTATACAAATATAAAGACATTGCCGGAGTCTTTGTGCAACTTGTATAATTTGCAAACACTGAAGTTGTATTATTGTTCTAAGCTAACTCCGATGCCTAGTGGTTTGCAAAATCTTGTGAGTTTGCGGCATCTTGATATTAGAGAAACTTCTTTGGAAGAAATGCCCAGAAAAATGAGCAATTTGAATCATTTACACATTTTAAGTTACTTTGTCGTGGGCAAGCACGAAGACAATGGAATCCAAGAGTTAGGAGGGCTTGTAAATCTTCATGGATCACTTGAGATTAAGAAGTTGGAGAATGTTGTCGATGTAAAAGAAGCAAGGAGTGCAAGGATAATAGATAAGAAGCAAATTGATAGCTTGTTGTTGGAGTGGTGCTCAGGTGATGCTATGGTTTCAAACACACAAATTGAAAGAGATATACTCAACAACTTGCAACCACACAATGGCTTCAGAGAGTTGACAATTGATGGATACAGAGGAACAATATTTTCAAATTGGGTTGGGCATTCCTCTTACCAAAACATGACACGTGTGTCTCTGATGTGTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAACTGTCATCTCTTAAGTCCCTGCTAATTGAAGGTTTCGATCAGCTTAGGAGTATTGGCAATGAGTTTTACAAGAATGAAGAAGATCATCATTCTTCGCATATTCCACCGTTTCCTTCACTGCAGAGTTTGGAATTTTTTGATATGGCATGTTGGGAGGAGTGGAACTTACCTGACTCAGAAGCTTTTCCTCAGCTTAAGATCCTTCGAATATCAGAGTGTCCTATGTTGAAGGAAGAGATACTTCATGAGGTATTCTTGAGAATCATTTCTTCTTTGTCGGATGTTTCCAAAGTTCGCGAATTACGTATAGACGACTATTTTATAGGAGAAGGCATTGGGGACATGTTTCTTGGTGGGGATACTTTAACAATAAGGGGATGTGAATCTGTGAAGGAGTCTGCATTTAAGGCAATGATCAGCACCAACCATATAAGTTGCCTCCAAGAAATACACATCGCAGGGTATTCCTCTTATGTATTCTTACCGGGCAATTGTTTTCCCAAATATTTGCAAAAGCTGCAAATCTGGAGGTGTAGAAAACTAGAATTCCCCGAGCAACAGCAGCAGAAGTATGATTTGGTAGAGCTACTAATAGAAGAGAGTTGTGATTCACTGGCCTCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATCTCGAGATAAGAGGGTGTAGGAATCTGGAATCATTCTCAATGTCAGAGCCACCACATGCTGCTCTTCAACATCTCACCATCGAGTACTGCAACAAATTAGTGTCATTTGCAGGAGAAGGACTGGCTGCACCCAACTTGACTCATCTCGAGCTCAGATACTGCAACATTTTAGAGGCATTACCACATGACATGAATAGTCTACTCCCAAGTTTACAGTCTCTCGACATATATGGTTTCTCAGACACTTGGAGGTTGCCAGAGGGTGGTTTACCGCCTAACTTGAAATCACTTGCTGTGGGAATTTGCGAGCAACAAATGAGGGATCTATCATGGATGGGTAACTTGGACGCCCTCACTCATCTTAAAATTTCAGGTTATAAGTGCGAGAACATAAAGTCATACCCAGAGGTGGGTTCGTTGCCTCACCTTCCCTCCCTTACCACTCTTGAGATATGGTTGTTCAATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCACCTCGCCTCCCTCCAACAACTACACATTTATTGCTGTCCAAATCTGGAGAATATGGAAGGAGAAAAGTTGCCTCCCTCTCTCTTGCTACTTCAAATTTATAGCTGTGATTTGCTGGGAGAACACTGCAGGAACAAGCATCAACTAATCTGGCCCAAAATTTCCCACATCCCCACCATTCAAGTCGAACAGTTTCTCAATAGAGATTTCTGA 3729 0.4065 MAGALVGGAFLSGFINVVFDRFLTTDAVNLVLGKKLGPDLVQRLKTALLGAEALVADAELKQFGNPSVRKWLDSLRDAVYCAEDLLDTVLTKSPTQKEVRPFLNTINFFINRDREMVDNMERVVRRIEDLGKQKDNLGLEKIPTGSSSWRIPSSSLVRGKVYGREDDKKALIKMLNDNSEHNLSVIAIVGIGGVGKTTLAQSVYNNEEEFMKGFDLKAWVCISENFDIAETTKNVLKEISPHTQCLDHFNSLHHALKEKLLNKKFFIVLDDVWSDDGDRWINFLTPFQYGKKGSIVLLTTRGKNVALAVQNCHPYFLRGLSEDYCWSVFADNASFPQSNGNAALEGIGREIVKMCGGMPLAAETLGRLLRTKHDVEEWNKILMSDIWEFSVEKSKIIPALLISYFHLPPHLKRCFVYCALYPKDYKFKKDELILLWMAEDLLPPPKRGESLEEVGCECFDELTSRLFFTKLQIAHDYFVMHDLLHDLAIFLAGDFYCNSEELGKEEEIRMQTRHLCVNLNHRSSKLLNLISKVESLRTLLLFGDLSSPNCNIEEATCDILPKCKYLRVLSFDKLDVLPNSIGELIHLRYLDLSYTNIKTLPESLCNLYNLQTLKLYYCSKLTPMPSGLQNLVSLRHLDIRETSLEEMPRKMSNLNHLHILSYFVVGKHEDNGIQELGGLVNLHGSLEIKKLENVVDVKEARSARIIDKKQIDSLLLEWCSGDAMVSNTQIERDILNNLQPHNGFRELTIDGYRGTIFSNWVGHSSYQNMTRVSLMCCKNCCMLPSLGQLSSLKSLLIEGFDQLRSIGNEFYKNEEDHHSSHIPPFPSLQSLEFFDMACWEEWNLPDSEAFPQLKILRISECPMLKEEILHEVFLRIISSLSDVSKVRELRIDDYFIGEGIGDMFLGGDTLTIRGCESVKESAFKAMISTNHISCLQEIHIAGYSSYVFLPGNCFPKYLQKLQIWRCRKLEFPEQQQQKYDLVELLIEESCDSLASLSLDVFPNLKNLEIRGCRNLESFSMSEPPHAALQHLTIEYCNKLVSFAGEGLAAPNLTHLELRYCNILEALPHDMNSLLPSLQSLDIYGFSDTWRLPEGGLPPNLKSLAVGICEQQMRDLSWMGNLDALTHLKISGYKCENIKSYPEVGSLPHLPSLTTLEIWLFNNLETLECNELLHLASLQQLHIYCCPNLENMEGEKLPPSLLLLQIYSCDLLGEHCRNKHQLIWPKISHIPTIQVEQFLNRDF* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2945 1242 PRINTS Disease resistance protein signature 185 200 - -
Amo03g2945 1242 PRINTS Disease resistance protein signature 355 369 - -
Amo03g2945 1242 PRINTS Disease resistance protein signature 259 273 - -
Amo03g2945 1242 PRINTS Disease resistance protein signature 605 621 - -
Amo03g2945 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 418 IPR027417 -
Amo03g2945 1242 Coils Coil 41 61 - -
Amo03g2945 1242 Pfam Rx N-terminal domain 39 97 IPR041118 -
Amo03g2945 1242 PANTHER DISEASE RESISTANCE PROTEIN RP 40 977 IPR044974 GO:0006952
Amo03g2945 1242 Gene3D Ribonuclease Inhibitor 510 873 IPR032675 -
Amo03g2945 1242 Gene3D - 21 123 - -
Amo03g2945 1242 Pfam NB-ARC domain 164 382 IPR002182 GO:0043531
Amo03g2945 1242 SMART LRR_typ_2 584 607 IPR003591 -
Amo03g2945 1242 SMART LRR_typ_2 631 654 IPR003591 -
Amo03g2945 1242 Gene3D - 149 313 IPR027417 -
Amo03g2945 1242 PANTHER OS05G0414200 PROTEIN 40 977 - -
Amo03g2945 1242 Gene3D Ribonuclease Inhibitor 874 1089 IPR032675 -
Amo03g2945 1242 Gene3D Ribonuclease Inhibitor 1090 1233 IPR032675 -
Amo03g2945 1242 SUPERFAMILY L domain-like 924 1215 - -
Amo03g2945 1242 Gene3D - 319 402 IPR042197 -
Amo03g2945 1242 Gene3D - 403 489 IPR036388 -
Amo03g2945 1242 SUPERFAMILY L domain-like 479 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2945 Amo-Chr3 121384758 121388588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2945 173 835 WRKY Transcription Factor Family AT5G45050 22.238 4.43e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2945 - - adu:110277771 1650.18