Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2943 ATGTTTTCCATAGCAATATTCTTGGTTTCTTTAACTTGTCTGTGGCTATGGGGATGCAGCAAGAAGGGTAAGAGATTACCTCCTGGTCCAAGAGGATTGCCAATCTTGGGGAGCCTTCACAAGCTGGGAGCTAACCCCCATCGCGTTCTGCACAAACTAGCACAAAAACATGGACCCATCATGTACCTGCGCCTAGGTTTTGTGCCAACCATTGTTGTTTCTTCATCCCAAGCTGCTGAATTGTTCCTCAAAACACATGACCATGTCTTTGCTAGCAGACCACCTATTGAAGCTGCAAAGTACATCTCTTGGGAGCAGAGAAATATGGTTTTTGCTGAATATGGCCCTTACTGGCGCAACATGCGTAAGATGTGCACATTGGAATTACTGAGCCACACCAAAATCAACTCCTTCAAAAGCATGAGGCAAGAGGAGGTTGACCTATTTATCAAGCTTATGAGAGAAACCGCCAGTGATGGAGTTGCTGTTGATCTTAGTGCCAAGGTTGCAGCACTAAGTGCAGACATGAGTTGTAGAATGATTTTGGGAAAGAAGTACATGGACGACGACTTGGACGAGAAAGGGTTCAAAGCTGTGATGCAAGAGATATTGTATTTGGCAGCAACTCCAAACATAGGTGACTTTATTCCTTACATAGGTGCACTTGATCTTCAAGGGTTAATTAAGCGCATGAAGAAAGTGCGCAAAATCTTTGATGACTTCCTTGACAAAGTTATACATGAGCACATGCTATCAGAAAACAAAAAAGACAAAGCTAAGGACTTTGTGGATGTCATGTTGAGCTTTGTTGGCACTGAAGAATCTGAATATCGTATTGAACAGCCTAATATCAAAGCAATATTGTTGGATATGCTGGTTGGTTCAATGGACACTTCAGCTACAGCAATTGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGGGTGATGAAGAAAGTTCAAATGGAGTTGGAATCTGTGGTGGGTTTGAATAGGGTGGTGGAGGAGTCAGACTTGGACAAATTGGAGTATTTAGACATGGTCATCAAGGAAACCATGAGGATTCATCCAGTGGGACCATTACTAATACCACACCAATCTGTGGAAGATTGCATGGTTGCAGATTTCTTCATACCCAAAAATTCCAGGGTGATAATAAATGCATGGACAATTATGAGAGACCCAAGTGCTTGGACTGAGCCAGAGGAATTCTGGCCAGAGAGATTTGAGGGACAAGACATCGATGTTAAAGGGAAACACTTCCAACTGATACCATTTGGGTCTGGCAGAAGAGCATGTCCTGGATTACAGTTAGGGCTAACTGTGGTTCGATTAATGGTGGCACAACTTGTGCATTGCTTTGATTGGAAGTTACCAAATGGGATGTTGCCAAGTGAGTTGGACATGAATGAGGTGTTTGGCCTGACAATGCCTAGGGCCAATCATCTATTTGCCATTCCTACTTATCGGCTCAACAATGAAAGTGCAATAATTTTTTTTTCACTTATTTGTCTGTGGCTATGGGGATGCAACAACAAGGCTAAGAGATTACCTCCTGGTCCAAGAGGGTTGCCAATCTTGGGAAGCCTTCACCTCTTGGGGGGACATCCTCATCGTGATCTTCACCGGCTAGCACAAAAATATGGATCTATCATGCACTTGCGCCTAGGTTTTGTGCCCACCATAGTTGTTTCTTCACCGCAAGCTGCTGAATTGTTCCTTAAGATCCATGACCATGTCTTTGCAAGTAGACCACCCAGTGAAGCTGCAAAGTACATCTTTTGGGGGCAGAGGGACATTGTCTTTGGTGAATACGGTCCTTATTGGCGCAACATGCGTAAGATGTGCACCTTGGAACTACTAAGCCAAACAAAGATCAACTCTTTCAGGAGCATGAGGCAAGAGGAGATTGACTCGTTTATCAAGCTTCTGAGAGATGCAGCCAATGATGGTGTTGCCGTTGATGTTAGTGCCAAGGTTGCAACACTGAGTGCTAACATGAGTTGTAGAATGGTTCTGGGAAAGAAATACATGGATCAGGACATGGATAAAAAAGGGTTCAAAGCTGTGATGCAAGAGTCATTGCGTTTAGCCGCCGTTCCAAACATAGGTGACTATATTCCGTATGTTGGTGCACTTAACCTTCAAGGATTAACTAAGGGCATGAAGGCAACGGGGAAAATATTTGATAACTTTTTTGAGAAAGTTATTGATGAGCACATTCAATCAGAGAGCAAAGAAGACAAGGTCAAGGACTTTGTGGATGTCATGTTGGGCTTTCTTGGCACTGAAGAATCTGATTATCGTGTTGATCGCCTGGATATCAAAGCCATATTGCTGGATATGATGCTGGCTTCAACAGATACTTCAGCTGCAGCAATAGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGGGTGACGAAGAATCTTCAAATGGAGTTGGAATCTGTGGTGGGAATAAAGAGGGTAGTGGAGGAATCAGACTTGGACAAATTGGAGTATTTGGACATGGTCATCAAGGAAACCATTAGGATCCATCCAGTGGGACCATTACTAATACCACACCAATCCATGGAAGATTGCAATGTTGGAGATTTCTTCATACCCAAGAAATCCAGGGTGATAATAAATGCATGGGCAATTATGAGAGATCCAAGTGCTTGGATTAAGCCAGAAGAATTTTGGCCAGAAAGGTTTGAGCGAATAGACGTTGATTTTAGAGGGAGAAACTTCCGATTTATACCATTTGGATCTGGCAGAAGAGGATGCCCTGGATTACAGCTAGCCCTAACTATTGTTCGGTTAGTGGTGGCCCAGCTTGTGCATTGCTTTGATTGGAAGTTACCGAATAACTTGTTGCCAAGTGAATTAGACATGAGTGAGGAGTTTGGCCTCTCAATGCCTAGGGCCAATCATCTATTTGCCATTCCTTCTTATCGTCTTCACAATGAACGGGATATTTCTTCTATGCACGATGTGCTGGTTGGTTCAATGAACACTTCAGCTACAGCAATTGAGCGAGCACTTTCAGTAATAAAGAATCCAGGGGTGATGAAGAAAGTTTAA 3069 0.4327 MFSIAIFLVSLTCLWLWGCSKKGKRLPPGPRGLPILGSLHKLGANPHRVLHKLAQKHGPIMYLRLGFVPTIVVSSSQAAELFLKTHDHVFASRPPIEAAKYISWEQRNMVFAEYGPYWRNMRKMCTLELLSHTKINSFKSMRQEEVDLFIKLMRETASDGVAVDLSAKVAALSADMSCRMILGKKYMDDDLDEKGFKAVMQEILYLAATPNIGDFIPYIGALDLQGLIKRMKKVRKIFDDFLDKVIHEHMLSENKKDKAKDFVDVMLSFVGTEESEYRIEQPNIKAILLDMLVGSMDTSATAIEWALSELIKHPRVMKKVQMELESVVGLNRVVEESDLDKLEYLDMVIKETMRIHPVGPLLIPHQSVEDCMVADFFIPKNSRVIINAWTIMRDPSAWTEPEEFWPERFEGQDIDVKGKHFQLIPFGSGRRACPGLQLGLTVVRLMVAQLVHCFDWKLPNGMLPSELDMNEVFGLTMPRANHLFAIPTYRLNNESAIIFFSLICLWLWGCNNKAKRLPPGPRGLPILGSLHLLGGHPHRDLHRLAQKYGSIMHLRLGFVPTIVVSSPQAAELFLKIHDHVFASRPPSEAAKYIFWGQRDIVFGEYGPYWRNMRKMCTLELLSQTKINSFRSMRQEEIDSFIKLLRDAANDGVAVDVSAKVATLSANMSCRMVLGKKYMDQDMDKKGFKAVMQESLRLAAVPNIGDYIPYVGALNLQGLTKGMKATGKIFDNFFEKVIDEHIQSESKEDKVKDFVDVMLGFLGTEESDYRVDRLDIKAILLDMMLASTDTSAAAIEWALSELIKHPRVTKNLQMELESVVGIKRVVEESDLDKLEYLDMVIKETIRIHPVGPLLIPHQSMEDCNVGDFFIPKKSRVIINAWAIMRDPSAWIKPEEFWPERFERIDVDFRGRNFRFIPFGSGRRGCPGLQLALTIVRLVVAQLVHCFDWKLPNNLLPSELDMSEEFGLSMPRANHLFAIPSYRLHNERDISSMHDVLVGSMNTSATAIERALSVIKNPGVMKKV* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2943 1022 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Amo03g2943 1022 PRINTS P450 superfamily signature 785 802 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS P450 superfamily signature 838 849 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS P450 superfamily signature 915 924 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS P450 superfamily signature 924 935 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 Pfam Cytochrome P450 27 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 Pfam Cytochrome P450 518 966 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 492 - -
Amo03g2943 1022 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 SUPERFAMILY Cytochrome P450 518 978 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PANTHER CYTOCHROME P450 93A3-LIKE 498 983 - -
Amo03g2943 1022 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 498 983 - -
Amo03g2943 1022 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 917 926 IPR017972 GO:0005506|GO:0016705
Amo03g2943 1022 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 Gene3D Cytochrome P450 510 977 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2943 1022 PANTHER CYTOCHROME P450 93A3-LIKE 4 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2943 Amo-Chr3 121374605 121380681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2943 525 982 Monolignol Biosynthesis Gene Families AT4G36220 41.597 8.14e-125 389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3845 13 129227671 129233714 Amo03g2943 03 121374605 121380681 hybridization