Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2942 ATGGAGTTGGAATATATGGTGAGTATAAATAGGGTGGTGGAGGAATCAGAATTGGAAAAGTTGAAGTATTTAGACATGTTCATCAAGGAAACCTTGAGAATCCATCCAGTGTCACCATTACTGGGTCATAATAAATGCATGGACAATTATGAGACCCTAGAATTTGGACTGAGCCGGAGGAATTCTGGCCAGAAGGATCTGAGGGAAGATAGACTGATGTTAGAGGGAGAGACTTCAGACTTCCAATTGATACCGTTTGGGTCTGGCAGAAGAGGATGTCCTGGACTGCAGTTAGCCCGAACTGTGGTTTGGTTAGTGTTGGCACAGCTTGTGCATTGCTTTGATTGGAAGTTAAAACAATTTATTGCCAAGTGA 375 0.4267 MELEYMVSINRVVEESELEKLKYLDMFIKETLRIHPVSPLLGHNKCMDNYETLEFGLSRRNSGQKDLREDRLMLEGETSDFQLIPFGSGRRGCPGLQLARTVVWLVLAQLVHCFDWKLKQFIAK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2942 124 SUPERFAMILY Cytochrome P450 8 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PANTHER STEROID 21-HYDROXYLASE-RELATED 2 58 - -
Amo03g2942 124 PANTHER STEROID 21-HYDROXYLASE-RELATED 79 120 - -
Amo03g2942 124 PANTHER CYTOCHROME 79 120 - -
Amo03g2942 124 Gene3D Cytochrome P450 56 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PRINTS P450 superfamily signature 26 37 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PRINTS P450 superfamily signature 93 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PRINTS P450 superfamily signature 84 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PRINTS E-class P450 group IV signature 77 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PRINTS E-class P450 group IV signature 21 37 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 PRINTS E-class P450 group IV signature 93 111 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 Gene3D Cytochrome P450 1 55 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 86 95 IPR017972 GO:0005506|GO:0016705
Amo03g2942 124 PANTHER CYTOCHROME 2 58 - -
Amo03g2942 124 Pfam Cytochrome P450 77 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g2942 124 Pfam Cytochrome P450 6 44 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2942 Amo-Chr3 121374169 121374604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2942 2 118 Monolignol Biosynthesis Gene Families AT4G36220 39.706 5.35e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2942 - K20562 vvi:100264547 115.931