Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo03g2918 | ATGGATTACTATTATGTGAACCCAATAAACCCCAATTACGGTGCTCATCATGATGATGATGACTACTCTGCCATGATGAGCATGTCCGATTTCATGATATCCGATTTTCTTGTGGCTGATGATGATGCATATGGGTATGGTGTTGATGATCATCATCATAATAATCAAGAGAGTGGATCACAATCGCAAAGTACTAATGAATCGTCGGAGATGGCAGCCTTCAGCGATGTCACTACTACCAATAATAGTGGTGAAGCCTCTAGCATCAACAATAACATAAAATGCAAAAATGGGAGTAAGAAAGAAGTGAATTCAAGAGTGGCGTTTAGAACGAAATCGGAGCTTGATGTTATGGATGATGGATACAGATGGAGGAAGTACGGAAAAAAGGCCGTCAAGAACACTCCAAATCTAAGGAACTATTACAAGTGTTCGAGTGAAGGATGCGGTGTGAAGAAGAGGGTGGAAAGGGACAGAGACGACTCAAGCTATGTTATAACAACCTATGAAGGGATACACAATCATGCAAGCCCTTTTACCTACTAA | 546 | 0.4084 | MDYYYVNPINPNYGAHHDDDDYSAMMSMSDFMISDFLVADDDAYGYGVDDHHHNNQESGSQSQSTNESSEMAAFSDVTTTNNSGEASSINNNIKCKNGSKKEVNSRVAFRTKSELDVMDDGYRWRKYGKKAVKNTPNLRNYYKCSSEGCGVKKRVERDRDDSSYVITTYEGIHNHASPFTY* | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo03g2918 | 181 | Pfam | WRKY DNA -binding domain | 119 | 175 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo03g2918 | 181 | Gene3D | WRKY domain | 102 | 179 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo03g2918 | 181 | MobiDBLite | consensus disorder prediction | 57 | 97 | - | - | |
Amo03g2918 | 181 | PANTHER | WRKY TRANSCRIPTION FACTOR 50-RELATED | 15 | 178 | - | - | |
Amo03g2918 | 181 | SUPERFAMILY | WRKY DNA-binding domain | 110 | 178 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo03g2918 | 181 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 15 | 178 | IPR044810 | GO:0003700 | |
Amo03g2918 | 181 | MobiDBLite | consensus disorder prediction | 48 | 97 | - | - | |
Amo03g2918 | 181 | SMART | WRKY_cls | 118 | 177 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo03g2918 | 181 | ProSiteProfiles | WRKY domain profile. | 113 | 178 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo03g2918 | Amo-Chr3 | 120822808 | 120825602 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo03g2918 | 83 | 177 | WRKY Transcription Factor Family | AT5G64810 | 65.000 | 4.17e-41 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Amo03g2918 | WRKY | 1.2e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo03g2918 | - | - | adu:107480370 | 306.605 |