Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2829 ATGGGCACAAATACGGGGAAGGATTTGCCGTGGATCATTCATGGGAGTACAATGGGTATATCAAACACCAACTACAATTRCATTCTGCACATCAACGGTGATTTTCAAGAGGTCAAGGATTTTCGCAAGAGTGTCATAATATCAGGTGTACCTGCTGCAACTCAAGTTTCTCAAATACCGGGAGAGCCGACATATTCACTCGAAGAGGACCTACTTAACCATTCCATTTATAAGCCCATCTCCGAGCTYAAGGATTCAATTGAGAATGGGCTCTTTGTCACTATTGGCACGGTTATATCCATTGATCCTAAGAATGGGTGGTGGTACAAGAGTTGCAAGCATTGCTTCCATTCTTTACAAGAAGCCGAGAACTCATACCACTGTGCTAGGTGTGAGACATACCCATCGTCTCACACTCCAAGGTTTAGCATAAACATGCGAGTTGCTGATGAGACCGATACGGCTTCTTTCCTACTGTACGATAAGGAGGRGTCCAAATTCCTTGGTATATCCGCATCCGATCTCAGACTCGCACAACTAACCAGGGGTGGAGTTAACYAGGAATATCCAACAGAGCTTAACTCACTGATGGGAAAGAAATTTCTGTTCAAAGTATCTGTGAAAATGGAAGATCTTAATGCATTCCAACCATGTAGGATAATTGTTACTAAGCTCTGTGCGGACAACTCRGTTATCACAAAATTTACTGCGAAGACTAGKTTTGACGAGGGTACAACCTCTCCCTCTGTTGAGACTTTATCCCAGGGAACAAATGATGGATTCTCAACTCCAAATGATAAAATTATCACTGGTGGGTGGTCTAAGAAGCTGATCGACGTGTACCCCGATTCTGCCCGTGCATCATCATCATCCAAATGCAGGAAAGTGACAGAGGGTGCCACTGCAACRATTGTCGAGATTCATGATGAGTAG 933 0.4352 MGTNTGKDLPWIIHGSTMGISNTNYNXILHINGDFQEVKDFRKSVIISGVPAATQVSQIPGEPTYSLEEDLLNHSIYKPISELKDSIENGLFVTIGTVISIDPKNGWWYKSCKHCFHSLQEAENSYHCARCETYPSSHTPRFSINMRVADETDTASFLLYDKEXSKFLGISASDLRLAQLTRGGVNXEYPTELNSLMGKKFLFKVSVKMEDLNAFQPCRIIVTKLCADNSVITKFTAKTXFDEGTTSPSVETLSQGTNDGFSTPNDKIITGGWSKKLIDVYPDSARASSSSKCRKVTEGATATIVEIHDE* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2829 310 Pfam Replication factor-A C terminal domain 93 224 IPR013955 -
Amo03g2829 310 SUPERFAMILY Nucleic acid-binding proteins 79 226 IPR012340 -
Amo03g2829 310 PANTHER BNAC01G35430D PROTEIN 92 235 - -
Amo03g2829 310 CDD RPA1_DBD_C 80 213 IPR013955 -
Amo03g2829 310 Gene3D - 72 232 IPR012340 -
Amo03g2829 310 PANTHER REPLICATION FACTOR A 1, RFA1 92 235 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2829 Amo-Chr3 119029808 119031528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2829 91 222 Core DNA Replication Machinery Family AT5G08020 29.323 2.37e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2829 - - ahf:112707100 400.208