Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2828 ATGGCTAGCACCTTCAACAATGTCAAGGACATTGATGCATCCCATGACAACTTGACCTATAGGATCAAGGTGCGTTTGATTAAGATTTGGACTCTATCTACGGCTGAGCAGAAATTTCAAAAGCCAATGCTGGAGCTGGTGGTCATGGATAATCAGGGAGATCGGATCCAATGTTCAATTRGAAACCCTCATAGGAGGTTATTTGAGGCCGACCTTACCGAAGGGAAAATATACACTATCTCCAATTTTTCAGTTGCTCAGAATGACCTCAAGTACAAAGCCACCAATCATGTTAGCAGAATATATTTTAAGAGAGATACCCAGCTTAGGGTGGTTCAGGATCCTCTATTCCCTACACATATTTTTCGCTTTGTGCCCAATGAAGTAATACTTAACCACACCAATGCTCAGTCCCATTTAATTGATMTAATTGGGCTCCTCACTGCTAAGGGTGACATTATTGAATTCACAAAGAATGGAAAGAAGTCCATRTACATTGTCATAGAACTTGATGACCTGAGGGGAAATGGTACCATTCGATGTACTTTGTGGGAAGAATTTGTAACTAAATTGGTAAAGCATATGGAAGAGACACCAACCTCAGAATATATACTTATTATACAATTTGCGAAGTTTAACCTATTRAAAGGTTCGTCACGTATTGATTCTGAATTTTTCTGTGTCAAGTAA 690 0.3884 MASTFNNVKDIDASHDNLTYRIKVRLIKIWTLSTAEQKFQKPMLELVVMDNQGDRIQCSIXNPHRRLFEADLTEGKIYTISNFSVAQNDLKYKATNHVSRIYFKRDTQLRVVQDPLFPTHIFRFVPNEVILNHTNAQSHLIDXIGLLTAKGDIIEFTKNGKKSXYIVIELDDLRGNGTIRCTLWEEFVTKLVKHMEETPTSEYILIIQFAKFNLLKGSSRIDSEFFCVK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2828 229 CDD RPA1_DBD_A_like 21 107 - -
Amo03g2828 229 Gene3D - 117 226 IPR012340 -
Amo03g2828 229 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Amo03g2828 229 PANTHER BNAC08G15530D PROTEIN 23 167 - -
Amo03g2828 229 PANTHER REPLICATION FACTOR A 1, RFA1 23 167 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo03g2828 229 SUPERFAMILY Nucleic acid-binding proteins 135 219 IPR012340 -
Amo03g2828 229 Gene3D - 5 114 IPR012340 -
Amo03g2828 229 SUPERFAMILY Nucleic acid-binding proteins 5 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2828 Amo-Chr3 119027216 119028203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2828 48 219 Core DNA Replication Machinery Family AT2G06510 25.843 1.45e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2828 - - adu:107479382 442.58