Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2813 ATGAGCAAAGAAGAGAAGGAGGGAAGAAGAGAACCAAATGAGTTTGAGAATAATAAGAAAGTAAGAGTAGAAGAAGAAACACAGAGAGTAGGAAAAAAGCCTATTATTCAAATGAAGAAGATACAAGGTTGTGAGGTTGAGGCCATTGGCATCAACTACAAGATCCTCAAACATAAAACCGATCACCCTTTTAAAATCTTCAGTAAATCACCACAACAAGAATTGGAAGAAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGCTGAAGAAGCAGAAGCAGAAAAAGCTTCCTCACAAAGGTGTTGCGGTGGAGGAGTAAGGCATGTTCTCAAGAATGTGAGTTTCAAAGCCAAGCCATGGGAAATCCTTGCAATTGTTGGGCCAAGTGGTGCTGGAAAATCATCACTGCTTGAGATTCTTGCAGGAAAAGTTACTCCACAGAGTGGTTCTGTGTTGCTGAATCACAAGCCTGTGGAGAAAGCTCAGTTCAGGAAGCTCTCAGGTTATGTAACACAGAARGATACTTTGTTTCCATTACTTACAGTTGAAGAAACTATGATGTTCAGTGCAAAGCTAAGGCTAAGGCTCCCTCAGGAGCAGCTCCAATCTAGGGTCAAGTCACTGATCAAGGAGCTCGGACTTGATCATGTTGCCGGGGCGCGAATTGGTGAYGAAAGGGTYCGAGGAATATCCGGTGGCGAAAGGCGCAGAGTTTCTATTGGTGTTGAAGTCATACATGATCCAAAGGTGTTGATTTTGGATGAACCAACTTCTGGTCTTGATAGTACTTCAGCATTGCAAATTATTGATATGCTTAAGGTGATGGCTGATACTAGGGGAAGAACCATAATCCTTAGTATCCATCAACCCGGATTCAGAATTGTGAAGTTGCTCAATTCATTGCTTTTGTTGGCAAATGGTTCTGTTTTACACCATGGCACTGCTGATTTGCTTAGTGTRAATATGAGGCTAATGGGTTTAGAGCTTCCCCTTCATGTCAATGTGGTTGAGTTTTCCATYGAGTCCATTGATGCCTTTCAGCAACAACAGATATGCAAGAGATTCCWGGTACAAACGCCAAGGCGATTGCAGGGGACGGYGCTGCCWCAGAAGAAAGGTGATGATGAACAAGGTGAGTGTAGAAGTGGTAGGTTTACTTTACAACAGCTCTTTCAACAATCCAAGGTGATTGATGAAGAAGCTATCAATGCTGGAATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATCCTCACTCATAGGTTCTCCAAGAACATCTTTCGTACAAAAGAGCTTTTTGCATGTAGGACTATTCAGATGCTGATTTCAGGGCTTGTTCTGGGATCCATCTTTTGTAATCTCAAGGATGATCTTGAGGGAGCAGAAGAAAGGGTTGGTCTATTTGCTTTCATTTTAACTTTTTTGCTATCAAGCACCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAGACATCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCCAATGGCCTAGTTTACCTACCATTTCTTCTAATCCTAGCCATTTTGTTCTCAATTCCATTATACTGGCTTGTTGGTCTCAACAAGAAYTTCATGGCATTTCTACACTTCYTGTTGCTGATATGGCTGATTCTATACACTGCAAATTCAGTTGTGGTCTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAGTCATTGCTGGTGTCATTGGATCATTCTTCTTGTTCTCTGGATACTTCATATCACAGCATGAGATTCCAAAATATTGGATTTTTATGCATTACATATCTCTTTTTAAGTATCCTTTTGAAGGGTTTCTAATAAACGAGTTCTCCAACTCAGGTAAATGCTTGGAGTACATGTTTGGTGGATGTGTGGTGAGTGGTGAAGATGTGCTCAAAGAAGAAGGTTATGGTGGGGAGAGTAATAGATGGAAAAATGTTGGGGTGATGATGGGCTTCATCTTGCTTTACAGGTTCATATCCTATGTGATTCTTAGATACAGATGCTCACAGAGGGGGTTCAGGAGTGTGGTCATCATCTAA 2103 0.4089 MSKEEKEGRREPNEFENNKKVRVEEETQRVGKKPIIQMKKIQGCEVEAIGINYKILKHKTDHPFKIFSKSPQQELEEAEEEEEEEEEEDAEEAEAEKASSQRCCGGGVRHVLKNVSFKAKPWEILAIVGPSGAGKSSLLEILAGKVTPQSGSVLLNHKPVEKAQFRKLSGYVTQKDTLFPLLTVEETMMFSAKLRLRLPQEQLQSRVKSLIKELGLDHVAGARIGDERVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLLNSLLLLANGSVLHHGTADLLSVNMRLMGLELPLHVNVVEFSIESIDAFQQQQICKRFXVQTPRRLQGTXLPQKKGDDEQGECRSGRFTLQQLFQQSKVIDEEAINAGMDFTCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLEGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSIPLYWLVGLNKNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISQHEIPKYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGGCVVSGEDVLKEEGYGGESNRWKNVGVMMGFILLYRFISYVILRYRCSQRGFRSVVII* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2813 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 321 IPR027417 -
Amo03g2813 700 SMART AAA_5 121 339 IPR003593 -
Amo03g2813 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 39 688 - -
Amo03g2813 700 Pfam ABC transporter 112 260 IPR003439 GO:0005524
Amo03g2813 700 Gene3D - 75 327 IPR027417 -
Amo03g2813 700 Coils Coil 68 103 - -
Amo03g2813 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 333 IPR003439 GO:0005524
Amo03g2813 700 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524
Amo03g2813 700 Pfam ABC-2 type transporter 422 630 IPR013525 GO:0016020|GO:0140359
Amo03g2813 700 MobiDBLite consensus disorder prediction 65 100 - -
Amo03g2813 700 MobiDBLite consensus disorder prediction 75 94 - -
Amo03g2813 700 MobiDBLite consensus disorder prediction 1 27 - -
Amo03g2813 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2813 Amo-Chr3 118671506 118673903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2813 110 338 Calmodulin-binding Proteins AT2G36910 25.620 3.97e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2813 K05681 - gmx:102665974 1062.75