Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2777 ATGGTCAAGTCCATCCTCGACACCTCTTCCGACAGCCGCAACCGCACCGTCGCCGCCACCACATGCCTCGAGGAACTCGCCAACTCCGACCACCGCCTATCCCAAGCCAACGATGCCCTGACACGTGACAAGACCAAGGACGCCCGCGCCTGGCTTACCGCCGCCCTTGTCTACCAGTACGACTGCTGGAATGGCCTCAAGTACGCCAACGACACATCCAAGGTCGGCGAAACGATGTCGTTTATCGACAACCTCACCCAACTCTCAAGCAACGCGCTCTCCATGGCCTTCTCCTACGACGCCTACGGGAAAGACCCGGCGACGTGGAAGCCTCCGGCGACAGAGCGCGACGGGTTCTGGGAAGCCACAGGATCTTCGGGCGGAGGTTCCGTACCAGGGTTCCCGACGGGCCTGAAGCCGGACGCTACGGTGTGCAAGGATGGCAGCAATGGGTGTTACAAGACGGTACAGGAAGCGGTTAACGCGGCGCCGAGTAACGGTAACGGCGGAAAGAGGTTCGTGATATACATTAAGGAAGGGGTATATGAAGAGACCGTCAGAGTTCCGTTAGAGAAGACGAATTTGGTGTTCTTGGGCGACGGCATGGGGAAAACGGTAATTACTGGCTCTGCTAACGCTGGCCAGCCCGGCATGACCACTTACAACTCTGCTACAGTCGCGGTTCTTGGGGATGGGTTCATGGCGAAGGATCTCACAATACAGAACACTGCTGGGCCTGATGCTCACCAAGCAGTGGCCTTCAGACTAGACAGCGATCTCTCAATCATTGAGAACTGTGAATTCATAGGCAACCAAGACACTCTCTATGCTCATTCCCTGCGCCAGTTCTACAAATCGTGCCGGATTATCGGGAACGTAGATTTCATCTTCGGCAACTCGGCCGCCATCTTCCAAGACAGCCAAGTCTTGGTGGCTCCAAGGCAAGTGAAGCCAGAGAAGGGGGAGAACAACGCTGTGACGGCGCACGGCAGGACAGATCCTGCACAGTCAACCGGGTTTGTGTTCCAGAACTGCCTGATCAATGGCACCGAGGAATACATGAAGTTGTATAATAGCAATCCCAAAGTGCATAAGAACTACTTGGGTAGGCCTTGGAAAGAGTACTCTAGAACAGTTTTCCTGAATTGCTTCTTGGAAGCATTGATCACACCCCAGGGTTGGATGCCATGGACTGGTGACTTTGCTCTCAAGACACTCTACTATGGAGAATTTGAGAATAAGGGACCTGGTTCTGATTTGTCTCAGAGGGTATCCTGGAGTAGCAAGGTCCCCTCGGAGCATGTTTTTGCTTATTCAGTGCAGAATTTCATCCAAGGAGATGAGTATATTCAATAA 1356 0.5361 MVKSILDTSSDSRNRTVAATTCLEELANSDHRLSQANDALTRDKTKDARAWLTAALVYQYDCWNGLKYANDTSKVGETMSFIDNLTQLSSNALSMAFSYDAYGKDPATWKPPATERDGFWEATGSSGGGSVPGFPTGLKPDATVCKDGSNGCYKTVQEAVNAAPSNGNGGKRFVIYIKEGVYEETVRVPLEKTNLVFLGDGMGKTVITGSANAGQPGMTTYNSATVAVLGDGFMAKDLTIQNTAGPDAHQAVAFRLDSDLSIIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSAAIFQDSQVLVAPRQVKPEKGENNAVTAHGRTDPAQSTGFVFQNCLINGTEEYMKLYNSNPKVHKNYLGRPWKEYSRTVFLNCFLEALITPQGWMPWTGDFALKTLYYGEFENKGPGSDLSQRVSWSSKVPSEHVFAYSVQNFIQGDEYIQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2777 451 Pfam Plant invertase/pectin methylesterase inhibitor 3 95 IPR006501 GO:0004857
Amo03g2777 451 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 98 IPR035513 -
Amo03g2777 451 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 12 95 IPR035513 -
Amo03g2777 451 PANTHER PECTINESTERASE 1 450 - -
Amo03g2777 451 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 1 450 - -
Amo03g2777 451 SUPERFAMILY Pectin lyase-like 137 450 IPR011050 -
Amo03g2777 451 CDD PMEI-like_3 1 95 - -
Amo03g2777 451 Gene3D - 138 451 IPR012334 -
Amo03g2777 451 Pfam Pectinesterase 141 447 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2777 Amo-Chr3 117883821 117886612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2777 2 449 Carbohydrate Esterase AT5G09760 71.744 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2777 - - adu:107480269 918.302