Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2732 ATGTTTGTGGAAAAACAAGTCCTCGTTGCTTCCCTTTTAGGTCCTGTTGCACTTGGATATTGGAATGTGGGTCCCTCAGTTGCACTGAAACATCACTTGATTTTGACATTGCCCTATTATGGCAACAATAAACTTCTCTTCTCCCTTCTCTCTATCAGTGTTTCATGCTCTACTTCTTCGTCCTATATGCTATGCTCAACTCCTAGCATGTTCTTTTCTAGATACACAAACATAGTTGAAATTTGCTTGGAGACCAAAAAAGCTTATATGTTTCACACAAAATTTATCCGGGATCCTCTGACAATGTTGACAAGTTGGCTCATATTCCTTAGTGTCTTGAAACTCACCTATGCAGTGAAGGAACCTGATATAGAAGGTGAAGCGCTGCTTGATCTTTTGAAGAATCTGAATGATTCCAATAATGGAATACAAGACTGGAACAGTTATATGGTGAGCCCGTGTTTCAGTTGGTCTCATGTCACTTGTAGAAACGGACATGTTGTATCTCTGGCCCTGGATTCAATTGGATTCTCTGGAACACTTTCTCCCTCAATTCTCAAATTGAAATATCTGGTTACCTTGGAATTGCAGAACAACAAACTTTCAGGCCCCTTGCCTGATTATATTGCCAACTTGACAACCCTGCAATATCTGAATCTTGCTGGCAATAACTTCATAGGCTCTGTACCAGCTTCATGGGCTCAACTTTCCACTCTCGAACATTTGGATCTTTCATCAAATCGTCTCACTGGAACTATCCCATTGCAACTCTTTTCAATTCCAGTGTTCAATTTTTCAAATACACAGCTTTATTGTGGTTCTAAGTTGGAGCAGCCATGTGATTCTAAATCCGACCGTCCAGCTTCAAAGAAGAAACCAAAACTTGCACAGGCAGTACAGTTTGCAAGTTGTGGTGCATTTGCACTTGTGTGTCTTGGGGCAATCTGCACATACAGATACCATCAAATGCACAAACAAAAAAGTGATGTCTTTGTTGATGTTTCAGGTGAGGATGAAAGCAAGATATCTTTTGGACAACTGAAAAGATTTTCATGGCGAGAACTCCAAGTTGCTACAAAAAGCTTCAGTGAAAGCAATGTAATAGGGCAGGGAGGATTTGGAAAAGTGTACAAAGGTATACTGTCGGATAATACCAAAATCGCCGTGAAACGCCTCACTGATTATCATAATCCCGGCGGAGAGGCCGCATTCGAGAGAGAAGTTCATCTTATCAGTGTTGCAGTTCATAGAAACCTCCTCAGACTAATTGGATTCTGTACAACCTCAACTGAGAGAATCCTAGTATACCCTTTCATGGAGAATCTAAGTGTAGCATATAGACTAAGAGATTTGAAAGCAGATGAGAAAGGTTTGGATTGGGGTGCAAGAAAGCGAGTGGCTTTTGGTACAGCACATGGTTTGGAGTATCTGCACGAACAATGCAACCCCAAGATAATACATCGCGATCTGAAGGCAGCAAACATCCTACTAGATGATGAGTTTGAAGCAGTACTTGGGGATTTCGGGCTAGCCAAGCTTGTTGACACAAGAATGACCCATGTTACCACTCAAGTCCGCGGCACAATGGGTCATATAGCCCCTGAATACTTGTCCACTGGAAAATCATCCGAAAAGACTGATGTCTTTGGATATGGCATCACACTTCTTGAACTGGTCACCGGCCAGCGCGCAGTAGACCTCTCTAGGCTTGAAGAAGAGGAGGATGTTCTTCTAATTGATCATGTTAAGAAGCTTCTGAAGGAGAACAGGTTGGAGGACATAGTGGATAGAAACTTGGAGAGTTATGATCCGAAAGAAGTGGAGAGAATTCTTCAGGTTGCATTGTTGTGCACACAATGCTACCCTGAGGATCGACCAATCATGTCTGAGGTTGTGAAAATGCTTCAGGGAGTGGGGTTAGCTGATAGATGGGCAGATTGGAAGCAAGTTGAAGATGCAAGGACTCATCAACAATTCTCACAAACCACTCATCAATTTCCTTGGAGTGATGAATCCACCCATGAACAAGAGGCCATTCAGCTTTCCAGGGCAAGATAA 2058 0.4237 MFVEKQVLVASLLGPVALGYWNVGPSVALKHHLILTLPYYGNNKLLFSLLSISVSCSTSSSYMLCSTPSMFFSRYTNIVEICLETKKAYMFHTKFIRDPLTMLTSWLIFLSVLKLTYAVKEPDIEGEALLDLLKNLNDSNNGIQDWNSYMVSPCFSWSHVTCRNGHVVSLALDSIGFSGTLSPSILKLKYLVTLELQNNKLSGPLPDYIANLTTLQYLNLAGNNFIGSVPASWAQLSTLEHLDLSSNRLTGTIPLQLFSIPVFNFSNTQLYCGSKLEQPCDSKSDRPASKKKPKLAQAVQFASCGAFALVCLGAICTYRYHQMHKQKSDVFVDVSGEDESKISFGQLKRFSWRELQVATKSFSESNVIGQGGFGKVYKGILSDNTKIAVKRLTDYHNPGGEAAFEREVHLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKADEKGLDWGARKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAVDLSRLEEEEDVLLIDHVKKLLKENRLEDIVDRNLESYDPKEVERILQVALLCTQCYPEDRPIMSEVVKMLQGVGLADRWADWKQVEDARTHQQFSQTTHQFPWSDESTHEQEAIQLSRAR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2732 685 Pfam Leucine rich repeat N-terminal domain 125 162 IPR013210 -
Amo03g2732 685 Gene3D Phosphorylase Kinase; domain 1 331 438 - -
Amo03g2732 685 SUPERFAMILY L domain-like 126 270 - -
Amo03g2732 685 SMART serkin_6 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2732 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Amo03g2732 685 Pfam Protein kinase domain 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2732 685 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Amo03g2732 685 SUPERFAMILY Protein kinase-like (PK-like) 340 636 IPR011009 -
Amo03g2732 685 PANTHER LRR RECEPTOR-LIKE KINASE 102 685 - -
Amo03g2732 685 MobiDBLite consensus disorder prediction 659 685 - -
Amo03g2732 685 MobiDBLite consensus disorder prediction 659 675 - -
Amo03g2732 685 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 102 685 - -
Amo03g2732 685 Pfam Leucine rich repeat 191 249 IPR001611 GO:0005515
Amo03g2732 685 Gene3D Transferase(Phosphotransferase) domain 1 439 655 - -
Amo03g2732 685 ProSiteProfiles Protein kinase domain profile. 362 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2732 685 Gene3D Ribonuclease Inhibitor 232 277 IPR032675 -
Amo03g2732 685 Gene3D Ribonuclease Inhibitor 124 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2732 Amo-Chr3 116411715 116414882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2732 122 685 Receptor kinase-like Gene Family AT5G10290 55.912 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo03g2732 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2732 - - gmx:100800886 981.474