Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2715 ATGGGGTCTGCCATAATTCGCAGGAGCATCACCCGCTACCTCAACCACCCTTCTCTTCTTTCTTCTTCTTCTTCTTGGTGTTTGAGTCAGCAACAACATGCACGTGTTTCAAACCCCCTTTCATCATTTCTTCACACCAAAACCAGCGGTGGCGGTGCAGCACTTCCTTCTTACATGCGAGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCACCATTGAAGAGTTCAACATGCCTCGACCCAAGGCCGGGGAGCTTCTCATCAAAACCAAGGCTTGTGGAGTTTGCCACTCTGATTTGCATGTTTTGAAAGGTGAAATCCCTTTCTCAAGTCCATGTGTTGTGGGTCATGAGATCACTGGTGAAGTTGTTGAACATGGACCTCTCTCTGACCCCAAAATTATTGAAAGGCTTCCACTTGGATCTCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTATTGTTCAAAGGGCCATGACGATCTATGTGAAGATTTCTTTGCTTATAATCGTGCAAAAGGAACACTATATGATGGTGAAACTCGATTATTTCTTAGAGGCAGTGGAAAACCAGTATTTATGTATAGTATGGGAGGGCTTGCAGAGTACTGTGTTGTGCCAGCAAATGCTTTGTGTGTATTACCGAAAGCATTGCCATATAGCGAATCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCTATGGCTCATGCGGCTGAGGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCAGATATAATTGCTGTGGATGTTCAGGATGAAAAGCTACAAAAAGCAAAGACATTTGGTGCTACTCACACTATAAATTCCACAAAGGAAGATCCCATCCAAAAGATCATTGAAATTACTGGTGGGAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCTCAGACATTTGCCCAGTGCACACAGAGCGTGAAGGACGGAGGAAAAGCCGTGATGATTGGACTGGCACAAGCTGGTTCTGTGGGTGAGATGGATATAAACCGGCTTGTTCGTAGAAAGATACAAATTATAGGGTCGTATGGAGGGAGAGCCAGGCAAGATCTTCCAAAGTTAATGAGATTAGCAGAATCAGGAATATTCAATCTTGAGCATGCTGTTTCTAGAAGATACACCTTTGAGGAGGCAGCCAAAGCATTCCAAGATCTCAACCAAGGAAACATTGTTGGTAGAGCTGTCATAGATATAAACTAG 1293 0.4493 MGSAIIRRSITRYLNHPSLLSSSSSWCLSQQQHARVSNPLSSFLHTKTSGGGAALPSYMRGAVYWEPNKPLTIEEFNMPRPKAGELLIKTKACGVCHSDLHVLKGEIPFSSPCVVGHEITGEVVEHGPLSDPKIIERLPLGSRVVGSFIMPCGNCSYCSKGHDDLCEDFFAYNRAKGTLYDGETRLFLRGSGKPVFMYSMGGLAEYCVVPANALCVLPKALPYSESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKTFGATHTINSTKEDPIQKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSVGEMDINRLVRRKIQIIGSYGGRARQDLPKLMRLAESGIFNLEHAVSRRYTFEEAAKAFQDLNQGNIVGRAVIDIN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2715 430 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 116 130 IPR002328 GO:0008270|GO:0016491
Amo03g2715 430 SMART PKS_ER_names_mod 66 427 IPR020843 GO:0016491
Amo03g2715 430 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 221 394 IPR036291 -
Amo03g2715 430 SUPERFAMILY GroES-like 55 262 IPR011032 -
Amo03g2715 430 CDD Zn_ADH10 59 428 - -
Amo03g2715 430 Pfam Zinc-binding dehydrogenase 259 390 IPR013149 -
Amo03g2715 430 Gene3D - 63 419 - -
Amo03g2715 430 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 59 427 - -
Amo03g2715 430 Pfam Alcohol dehydrogenase GroES-like domain 84 215 IPR013154 -
Amo03g2715 430 Gene3D - 236 373 - -
Amo03g2715 430 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 59 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2715 Amo-Chr3 115831949 115835848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2715 76 351 Monolignol Biosynthesis Gene Families AT4G37970 28.470 1.15e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2715 - - aprc:113855348 728.013