LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo03g2659	ATGAATATTCGGGGTCAGGGTCAGGGTCCGCCTCCGGTTCCGGCAGCGGCGGCAGGGATGATGGATGGGATTGGGGTTCCGGTTGCTCCGAATCCGATAAACAGGAAGAAGGGGACCGGGGTGAGGGCGTGGCTGCTTCTCGATTCCAGTGGTCAGAAGCAGGTTGTGGAGGCCGGCAAGCACGCCATCATGCGGCGCACAGGTCTCCCCGCCCGCGACCTCCGTATCCTCGACCCCCTCCTGTCCTACCCCTCGACCGTGCTAGGCCGTGAGAGGGCCATCGTGATCAACCTCGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCCCGCGACCCCTCCGTGACCCCTTTCGTGGAGGAGCTCCACTCGAGGATCCTCCGGCACCACCAAGTCCAGGGAGCTGCTGCGGCAGCTGCGGCTTCGGATGATTTCAAGCTGAGCAAAGTGTACGACTCGGAAGAAGGGCAATCAAGAGAGGGACAGGATGAAGATGAAGATCTCGATCCCGTTGGGGAGCAAGTGAAAGCCCAATCGAAGCAGAATGGTATTCAGAACGGTGATGGCATGAAGATCCTGCCGTTCGAGTTTGTGGCACTGGAGGCCTGCCTGGAGGCTGCGTGCAGTGTGTTAGAGAACGAGGCAAAAACCCTGGAACAGGAGGCCCACCCTGCCTTGGACAAGCTCACTTCCAAGATCAGTACTCTCAATTTGGAACGGGTTCGTCAAATTAAGAGCCGACTTGTTGCCATCACTGGTCGCGTTCAGAAGGTAAGGGATGAGTTAGAACACTTGCTCGATGACGACGACGATATGGCTGAGATGTATCTCACCGACAAGTTACAACAGCTCCACAGTTCTTCTGCCTCCTCTATAAATGATGATGATGTTGACAATGACCACCATAATCAGCTTGATGTCGATGACAGCATTCCTCCTGAAATATCACTGGAAGAGGGTGGAGCTGCTGCAAGCGATGACGATAATCAACATGATGATGACAGGTTATTAGTGGGAGTTAGCAGGGACAGCCGTGCTAGCACTACCTACAGTACCACAACTAAGCATCTTGATGTGGAGGAGCTTGAGATGCTCTTGGAAGCATATTTTGTGCAAATCGATGGCACACTCAACAAGCTCTCTACTCTAAGGGAATACGTGGACGACACAGAGGACTACATCAACATAATGCTGGATGACAAACAGAATCATCTGCTCCAAATGGGAGTCATGTTAACCACAGCAACTCTGGTAGTGAGTGCCTTTGTCGTTGTCGCTGGTATTTTCGGCATGAACATTCATATTGAGCTATTTGATTCAAATATTACCGGGAATGGAGAGTTCTTCTGGACTGTTGGGGGCAGTGCTGCTGGAACCATTTTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGTACAAACGCTTGCTCGAGTAG	1449	0.528	MNIRGQGQGPPPVPAAAAGMMDGIGVPVAPNPINRKKGTGVRAWLLLDSSGQKQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVEELHSRILRHHQVQGAAAAAAASDDFKLSKVYDSEEGQSREGQDEDEDLDPVGEQVKAQSKQNGIQNGDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLQQLHSSSASSINDDDVDNDHHNQLDVDDSIPPEISLEEGGAAASDDDNQHDDDRLLVGVSRDSRASTTYSTTTKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDSNITGNGEFFWTVGGSAAGTIFLYVVAIAWCKYKRLLE*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo03g2659	482	Coils	Coil	206	226	-	-
	Amo03g2659	482	Gene3D	Magnesium transport protein CorA, transmembrane region	175	410	-	-
	Amo03g2659	482	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	35	482	IPR039204	-
	Amo03g2659	482	CDD	Mrs2_Mfm1p-like	44	480	IPR039204	-
	Amo03g2659	482	MobiDBLite	consensus disorder prediction	299	313	-	-
	Amo03g2659	482	MobiDBLite	consensus disorder prediction	155	188	-	-
	Amo03g2659	482	PANTHER	MAGNESIUM TRANSPORTER MRS2-D-RELATED	35	482	-	-
	Amo03g2659	482	Gene3D	-	31	115	-	-
	Amo03g2659	482	MobiDBLite	consensus disorder prediction	292	339	-	-
	Amo03g2659	482	Pfam	CorA-like Mg2+ transporter protein	361	469	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo03g2659	Amo-Chr3	114991567	114996977	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo03g2659	44	482	MRS2 Gene Family	AT3G19640	65.632	0.0	543