Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2641 ATGGCTGAACTTACTTCAACTCCATCCACTTCTAAAAACGCCAATTTATCTTGTTTCCAACCAACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAAGAAAGGAAGAAGTGGTGCATGTCTTCACCAGTGCGCCCATTCCAAAACGGCATGATATGTTCTCTCTTGAGACTATAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCGCACCATTGATAATGGTTTTCCTCCTAAGGTCTTCAGTAATTTTTTATTTGGTTTTCCTCAAAATAGGGAAAGCTATGCAGCAGATTTGATTAAGGATGAATCAACTATTGGCACTGATTTGGGTAGTGCTGTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCTGGTAAATATTTGGATGACCTTGATGTTTTAAGTGTTACAGGTCAAGAAAAATCTATTCTATCTTCTTCGAAGCCTTTAAAGGAAGCTTTTGAAGCTCATAAGAAGCCACATGCGGAATGTGAATGGCATGATTCTAGCGCTACATGTGGGGTTAATGCTGCTCAAGGTAGTGGCAGCAATAGACGTGTTACCAAGTATCATAACATGAAAATCTGTCAGCAAAAGCAGCCAGCTTCTGGAATTACTCTGAAACATCCAGAGGAACTGAACAGTCCAGTAACACCAGCTCAGTTGCAATCTCTGGAAAAAGTAACTACAGAAAAAGTAAATACACCATCTGAGCATCTCGATGAAAGTTTTACATCTAAAGTTTCTAGAACTTTATTTGAAAATAAAGAAAGTAGTTCTAGGAGAAAGAAAGCTACAAGTGAAAAAAGTCAGATCACGTGTGAAAGAAAAAAGACTAGATCTGCCACTGCAACCAAATATCCACGAAAAAGGGGTTTAAGTCCCTCGATCATTGGTGAGAAAGAGAAGATATCCTCAGTGTCTACTTTATCAAGTTTCAAAAAGTCCAAATCAGGTAACTATTATCTGTTAGTTATTTCCCAGATCTCATTCATAAAAGCTAAATCTTATTTGGCCTAG 1059 0.3805 MAELTSTPSTSKNANLSCFQPTVCLYEWWLVKAKHGFERKEEVVHVFTSAPIPKRHDMFSLETIDGVYIIIRGFIDEQRTIDNGFPPKVFSNFLFGFPQNRESYAADLIKDESTIGTDLGSAVPKNVSSIDPEIFSAGKYLDDLDVLSVTGQEKSILSSSKPLKEAFEAHKKPHAECEWHDSSATCGVNAAQGSGSNRRVTKYHNMKICQQKQPASGITLKHPEELNSPVTPAQLQSLEKVTTEKVNTPSEHLDESFTSKVSRTLFENKESSSRRKKATSEKSQITCERKKTRSATATKYPRKRGLSPSIIGEKEKISSVSTLSSFKKSKSGNYYLLVISQISFIKAKSYLA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2641 352 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 332 - -
Amo03g2641 352 Pfam SANTA (SANT Associated) 23 102 IPR015216 -
Amo03g2641 352 MobiDBLite consensus disorder prediction 267 306 - -
Amo03g2641 352 MobiDBLite consensus disorder prediction 267 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2641 Amo-Chr3 114629184 114630962 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo03g2641 SANTA 2.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2641 - - adu:107480063 379.022