Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2640 ATGGCTGAGCTTACTTCAACTCCATCCAATTCTAAAAATGCCAATTTATCTTGTTTCCAACCAACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAGGAAAGCAGTTAGCCATTGGAGGCATTGCATCAAAAAGGGAAGAAGTAGTGCGTGTCTTCACCAGTGCTCCCATTGCGAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCGCACCATAGATAATGGTTTCCCTCCTGAGGTTTTCAGTCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGCTATGCAGCAGATTTGATTAGGGATGAATCAACTATTGGCACTGATTTGGGTAGTGCTATTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCTGCTCAAGAAAAATCTATCCTGTCTTCTTCGAAACCTTTAAAGGAAGCATTCAGGGCTCATGGGAAGCCACATGCTGAAGGTGAATGGCATGATTCTAACGCTTCATGTGGGGTTAATGCCGCTCAAGGTAGTGGCAGCGTTAGACGTGTTACCAGGTATCATAACATGAAAGTTCAGCAGAAGCAGCCAGCTTCTGGAATTACTCTAAAACATCCAGAGGAGCTGAACAGTCCACTGACACCAGCTCAGTTGCAATCTCTGGAAAAAGTAACTACAGAAAAAGTAAATACACCATCTGAACATCTCGATGAAAGCTCTACATCTAGAGTTTCTAGAACTTTTTTTAAAAATAAAGAAGGCTGTTTTAGGAGAAAGAAAGCTACAAGTGAAAAAAGTCAGATCACGTGTGAAAGAAAAAGGACTAGATCTGCCACTGCAACCAAATATCCACAAAAAAGGGGTTTAAGCCCCTCGATCATTGGTGAGAAAGAGAAGATATCCCCCGTGTCTGCTCTATCAGGTTTCAAAAAGTCCAAATCAGGAAGGTTGCTTCTACCACCCTTAGAGTTTTGGCGTAACCAGATACCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCAATAG 1092 0.4194 MAELTSTPSNSKNANLSCFQPTVCLYEWWLVKAKHGFEGKQLAIGGIASKREEVVRVFTSAPIAKRHDLFSLETTDGVYIIIRGFIDEQRTIDNGFPPEVFSHFLFGFPQNWESYAADLIRDESTIGTDLGSAIPKNVSSIDPEIFSAAQEKSILSSSKPLKEAFRAHGKPHAEGEWHDSNASCGVNAAQGSGSVRRVTRYHNMKVQQKQPASGITLKHPEELNSPLTPAQLQSLEKVTTEKVNTPSEHLDESSTSRVSRTFFKNKEGCFRRKKATSEKSQITCERKRTRSATATKYPQKRGLSPSIIGEKEKISPVSALSGFKKSKSGRLLLPPLEFWRNQIPIYNADHEVTEIQGGASVVQ* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2640 363 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Amo03g2640 363 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 190 358 - -
Amo03g2640 363 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 242 - -
Amo03g2640 363 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 242 - -
Amo03g2640 363 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 190 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2640 Amo-Chr3 114624413 114628549 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo03g2640 SANTA 5.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2640 - - adu:107480063 409.453