Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2615 ATGGGAAAAGAGCAAAAGCAGGAGAATGCAATCATCACCACCATACCTCCACAACCCCAGGACAAAGGCCAAGAGAACCAATCGGAACCCCAAAACGACGATTCCGAGCCTGAAATTGAGGTCCCATTGCCTCTCACCGATACTTCCCGGGTTTTGTATATGTTGGGAGATTTCACCGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACTGCCAATTCCAATTCCAATTCCTCTGGATTCCCCCACCGTCGCTGCCGTTCTGCCACCACCATGCCTTCTACTCCGACGTCAGTTGTTGCTTCCACCACTCACCATTCTCTTTCATTTTTATTTGCAATCATTGCCTCTGAAAATTTCAACAATGTCACTATCATTGGCGAATCAATTCAGGGTGCAAAATGTGATACAGCCCCCGAGCAAACAGAAATTAGTTTGTGGGATAGGCTTGGGAAAGCTTCCATGTTGGACATTGAATCGAGTTCATTTTCTTGGGATAAGCTCATTTCGCTTCACCACATTGAACACAGCAGTAGCAATGAACTTATTGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTGTTCTTTGCCTTTTTCAACTGCGCTGGGAATGATGATGCTGTTTCAAAAGAAGCAGCAGCTGTTATAAAGATATCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTGCCAGGTGTTTAGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCACCAAATAAAAGAAGCTGCAGAAAAGGCTAAAGAAGCATCATCTGATGAGGGTGATGAAATTGGGGAAGTGACCTGTTTTGAACTTTTGGAAGCTCTTGAGCTTAGCAGATGTCTCTTTTTTATGAGTTATGTACATGGATCACCTTTGCTTGAGAACTCTAGTGCATTTGAGTCCGAAGAATTTGCAGAAAGTACATCAGCAGCTCTTGGCAGGGTGCTGATGTTGGACCTAGTCATCAGAAATGAAGATAGGCTCCCTTGTCGTGAACTTAGGTGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGAAGATCTCTACAAATACAGATGCAATAGAAGCMGCCTTTGATTCTGCAATAAATCGATATAGACCAAAAGCGATTAGGGCTCTTCAAAAAGAAAGAAGGTCAACTTCAGTTGACAGCAGACTCATTTCTCATAAGCCTGACTTGATATCACAAGCTTCTGATCTGTCTGATATTTTAGAGTCTCCGAGATCCGTTGACATGAGCCTGGAGAGGCAAAARGAATCTCCCGATTTTAACATTGTAGCCATTGATTCTGGYGTTCCTCGCCGGCCCCCTGCTGGAAAACGTGCAAATGACCAGGTTAATTATCCTAAGTTGGTTGAGTTGTTATTGCATAGTTCTGAGTTTGCCTCAAACCTTTTATATGATATAACTGGAGGGAAATTAGGATGTCCTCCACCAGAAGACATGGATACACTTGATACACATGATACACATGCAAGTGACATGACACCAGTAGTTCATGCATTTCGTACCGGATTTCGGTCTTCTCTTAGAGATTTGCAGGGTTTCCATATATTCCTACTAACACTTCACCAAAGACTAGATATCTTGTTTCGATCATTTATGAACATTATAAGCAAAATATCTTTGGGGGAAGGTGACAAAGAGGATTCAGTGGTACCTGAGTCACCTTCAGTGGCTACTGGTAGTAATTGTTACTCTCCAACCAGTAGGGAGAGGTTTTCTAATGATAACCATCAAGATTTTACTGATTCAGAATCTCAGAGATATGCTTCAAGGGCATCATCTTGGGGAAATAGAGATAGTTGTGACTCTGCTTCAACATCAAAAGAAAGTCGGTATGGAAAGTTCTATAGAGGAAATGGGGAGCCACTTCGCAGTCTCCGCTTAACAACTAAGATTCGTGACTTTCACAAATTTGCAAAGGTCGATGCTGAATCTAATAAAGAATTGGAGCAGTGGAATGAAATGCTTAAAAGTGATGCTATCAAACTATGCCAGGAAAACAACTTCTATACAGGATTTTTTGAGGGTAGTGATAATAACATCATTGTTGATGCATATGAACTTAAGGTCAGACTTGAGCATATTCTTGAAAGAATTGCATTGATATCTGACGCTGCAAGTACAGAGAAACCATCTGCCGTTACAAGCACTGTGTTCATTGGTGGAGCACTAGCTGCAAGATCTGTTTATACATTGCAATACTTGGGAATCACACATATTATATGCTTGTGTACCAATGAAATTGGSCAATCAGATACTCAGTTTCCTGATCTATTTGAGTACAAGAATTTCTCTGTGTATGACAATGAAGATTGTAACATCAGCAGCATATTTGAAGAATCATGTGATTTTATAGATCATGTTGAACAAAATGGTCAGAAAGTTTTAGTTCATTGCTTTGAAGGGAAAAGCAGAAGTGTGACAGTGGTCCTTGCTTACTTAATGCTCAGGAAGAACTTAACTTTATTAGAAGCATGGAATGCTCTGAAACGAGTTCATCGYCGGGCACACCCTAATGATGGTTTCGCAAAGATCTTACTGAAACTAGATCAGAAACTGCACGGGAAGGTGTCAATGGAGTGGCAGCAGCGGAAACCGAGCATGAAAGTTTGCCCCATATGTGGGAAGAATGCAGGACTAAGCAGTGGCTCACTGAAACTGCATCTGCAGAAAGCMCATAAGAAGCTATCATCTGGGAGTGTAGATAGTGCCATGTCAATGGAGATCCAAAAGGCATTGACAGCTTTGAAGATTAGCCGTGGCGGAAGTGTCAGCCWGACACAAAGGTCCTCTCATTCAACAGATGAGTGA 2901 0.4202 MGKEQKQENAIITTIPPQPQDKGQENQSEPQNDDSEPEIEVPLPLTDTSRVLYMLGDFTAGPAFRFTQWLQLVRKRTANSNSNSSGFPHRRCRSATTMPSTPTSVVASTTHHSLSFLFAIIASENFNNVTIIGESIQGAKCDTAPEQTEISLWDRLGKASMLDIESSSFSWDKLISLHHIEHSSSNELIEDEMNKALEVTVNSGGVVFFAFFNCAGNDDAVSKEAAAVIKISSSRMATQSERLGYEFARCLGVQTPQARVIHNTSSEWHQIKEAAEKAKEASSDEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLENSSAFESEEFAESTSAALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKKISTNTDAIEAAFDSAINRYRPKAIRALQKERRSTSVDSRLISHKPDLISQASDLSDILESPRSVDMSLERQKESPDFNIVAIDSGVPRRPPAGKRANDQVNYPKLVELLLHSSEFASNLLYDITGGKLGCPPPEDMDTLDTHDTHASDMTPVVHAFRTGFRSSLRDLQGFHIFLLTLHQRLDILFRSFMNIISKISLGEGDKEDSVVPESPSVATGSNCYSPTSRERFSNDNHQDFTDSESQRYASRASSWGNRDSCDSASTSKESRYGKFYRGNGEPLRSLRLTTKIRDFHKFAKVDAESNKELEQWNEMLKSDAIKLCQENNFYTGFFEGSDNNIIVDAYELKVRLEHILERIALISDAASTEKPSAVTSTVFIGGALAARSVYTLQYLGITHIICLCTNEIGQSDTQFPDLFEYKNFSVYDNEDCNISSIFEESCDFIDHVEQNGQKVLVHCFEGKSRSVTVVLAYLMLRKNLTLLEAWNALKRVHRRAHPNDGFAKILLKLDQKLHGKVSMEWQQRKPSMKVCPICGKNAGLSSGSLKLHLQKAHKKLSSGSVDSAMSMEIQKALTALKISRGGSVSXTQRSSHSTDE* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2615 966 Gene3D Protein tyrosine phosphatase superfamily 718 886 IPR029021 -
Amo03g2615 966 ProSiteProfiles Dual specificity protein phosphatase domain profile. 740 885 IPR020422 GO:0006470|GO:0008138
Amo03g2615 966 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 20 102 IPR035010 GO:0004721|GO:0009737|GO:0043622
Amo03g2615 966 CDD DSP 741 878 - -
Amo03g2615 966 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 740 885 IPR029021 -
Amo03g2615 966 MobiDBLite consensus disorder prediction 575 613 - -
Amo03g2615 966 Gene3D - 317 448 IPR036940 GO:0016301
Amo03g2615 966 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 115 963 - -
Amo03g2615 966 MobiDBLite consensus disorder prediction 80 104 - -
Amo03g2615 966 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 20 102 - -
Amo03g2615 966 SUPERFAMILY Protein kinase-like (PK-like) 138 473 IPR011009 -
Amo03g2615 966 MobiDBLite consensus disorder prediction 1 43 - -
Amo03g2615 966 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 809 861 IPR000387 GO:0016311|GO:0016791
Amo03g2615 966 Pfam Actin-fragmin kinase, catalytic 149 428 IPR015275 -
Amo03g2615 966 Pfam Dual specificity phosphatase, catalytic domain 755 880 IPR000340 GO:0008138|GO:0016311
Amo03g2615 966 SMART dsp_5 740 882 IPR020422 GO:0006470|GO:0008138
Amo03g2615 966 MobiDBLite consensus disorder prediction 7 26 - -
Amo03g2615 966 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 115 963 IPR035010 GO:0004721|GO:0009737|GO:0043622
Amo03g2615 966 MobiDBLite consensus disorder prediction 584 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2615 Amo-Chr3 113725971 113731118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2615 38 951 Protein tyrosine phosphatase (PTP) family AT5G23720 61.622 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2615 K14165 - gmx:100791993 1385.55