Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2608 ATGGCTCCCTCTGACCAACCTCGCTACTCTCTTATCCCTTCCTTCCTTTACTCACCAAAAACATTGCTCAACAATGTGTCCTCGCATTATTCTTCATCATCATCACCACCTCCATTCTCAGGCTCAGAGGGTAGGAATAGTAATAATAATTTTATGATCCCTGCACCAAAAGAGAGTATTCCATTGTATTCTCCTGCTTACTACGCCGCATGCAGCTTTGGTGGCGTCTTCAGCTGTGGTCTCACTCACATGACCGTCACTCCTCTCGATCTCGTCAAGTGCAACATGCAGATTGACCCAGTAAAGTACAAGAACATATCATCAGGATTCGGAGTTCTGATGAAGGAGCAAGGAATGAGAGGGTTCTTCAGGGGTTGGGTCCCAACACTGCTTGGGTACAGTGCTCAGGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAGAAATACTACTCAGATCTTGCAGGCCCAGAGAATGCAGCCAAGTACAAAACCTTCATATTTCTAGCAGGATCAGCCTCTGCTGAAGTCATTGCTGATATTGCACTGTGCCCCATGGAGGCTGTCAAAGTTCGTGTGCAAACCCAACCTGGATTTGCGAGAGGTTTGTCAGATGGATTACCCAAGTTCATTAAGGCTGAGGGTGCTGGAGGGTTGTATAAAGGACTTGTTCCACTCTGGGGCCGCCAGATTCCATACACAATGATGAAATTTGCTTCGTTTGAGACTGTTGTGGAGATGCTGTACAAGAATGTCGTCCCAACACCGAAAGATCAGTGCAGCAAAGGATTGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATTGCTGGCGTGCTCTGTGCTATTGTCTCACACCCTGCAGACAATCTTGTTTCCTTCCTGAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATAGGGCTAGTTGGTCTTTTCACACGTGGACTTCCTCTTCGTATAGTTATGATTGGAACACTAACAGGAGCTCAGTGGGGACTCTATGATTCCTTCAAAGTATTTGTAGGGCTGCCTACCACTGGTGGAGGTGCACCTAAAGCTGCCAAGTAG 1077 0.4698 MAPSDQPRYSLIPSFLYSPKTLLNNVSSHYSSSSSPPPFSGSEGRNSNNNFMIPAPKESIPLYSPAYYAACSFGGVFSCGLTHMTVTPLDLVKCNMQIDPVKYKNISSGFGVLMKEQGMRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTFIFLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGAGGLYKGLVPLWGRQIPYTMMKFASFETVVEMLYKNVVPTPKDQCSKGLQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGGAPKAAK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2608 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 343 IPR018108 -
Amo03g2608 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 66 150 IPR018108 -
Amo03g2608 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 163 247 IPR018108 -
Amo03g2608 358 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 357 IPR044677 GO:0005315|GO:1990547
Amo03g2608 358 PANTHER PHOSPHATE CARRIER PROTEIN 1 357 - -
Amo03g2608 358 Gene3D Mitochondrial carrier domain 68 344 IPR023395 -
Amo03g2608 358 SUPERFAMILY Mitochondrial carrier 67 338 IPR023395 -
Amo03g2608 358 Pfam Mitochondrial carrier protein 169 251 IPR018108 -
Amo03g2608 358 Pfam Mitochondrial carrier protein 68 152 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2608 Amo-Chr3 113572131 113574201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2608 5 357 Chloroplast and Mitochondria Gene Families AT5G14040 76.776 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2608 K15102 - gmx:100800530 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3586 13 121946652 121948797 Amo03g2608 03 113572131 113574201 hybridization